RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 STX17P56962 302 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 DCAF5Q96JK2 942 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 ZNF215Q9UL58 517 aaPredicted RBP18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 AFMP43652 599 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 CCDC144BQ3MJ40 725 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 ARHGEF25Q86VW2 580 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 ARGLU1Q9NWB6 273 aaPredicted RBP18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 RAI14Q9P0K7 980 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 SLC12A7Q9Y666 1083 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 CLIC4Q9Y696 253 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 SIGLEC1Q9BZZ2 1709 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 RAD21O60216 631 aa18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 SART3Q15020 963 aaKnown RBP18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
PDZRN3-201ENST00000263666 EYA2O00167 538 aa18.71■□□□□ 0.59
PDZRN3-201ENST00000263666 XPO4Q9C0E2 1151 aaKnown RBP18.71■□□□□ 0.59
PDZRN3-201ENST00000263666 AKAP2Q9Y2D5 859 aa18.71■□□□□ 0.59
PDZRN3-201ENST00000263666 SMTNL1A8MU46 457 aa18.71■□□□□ 0.59
PDZRN3-201ENST00000263666 NDUFA8P51970 172 aa18.71■□□□□ 0.59
PDZRN3-201ENST00000263666 XAGE2Q96GT9 111 aa18.71■□□□□ 0.59
PDZRN3-201ENST00000263666 NSUN7Q8NE18 718 aaKnown RBP18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 UTP14AQ9BVJ6 771 aaKnown RBP18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 PCDHA7Q9UN72 937 aa18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 UBAC1Q9BSL1 405 aa18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 TMEM131LA2VDJ0 1609 aa18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 GNG11P61952 73 aa18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 TMEM87AQ8NBN3 555 aa18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 USP27XA6NNY8 438 aa18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 KARSQ15046 597 aaKnown RBP18.7■□□□□ 0.58
PDZRN3-201ENST00000263666 GPAA1O43292 621 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 PHKG2P15735 406 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 DPCR1Q3MIW9 517 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 PAXBP1Q9Y5B6 917 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 ZBTB43O43298 467 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 TPM1P09493 284 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 ST3GAL1Q11201 340 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 CLIC6Q96NY7 704 aa18.69■□□□□ 0.58
PDZRN3-201ENST00000263666 USP32Q8NFA0 1604 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 CDC42BPGQ6DT37 1551 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 ZNF827Q17R98 1081 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 SYNE4Q8N205 404 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 ZNF202O95125 648 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 PDIA3P30101 505 aaKnown RBP18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 TNNT3P45378 269 aaPredicted RBP18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 RESTQ13127 1097 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 STOX1Q6ZVD7 989 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 TRMT44Q8IYL2 757 aaKnown RBP18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 PLBD2Q8NHP8 589 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 CDKL5O76039 1030 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 DHX8Q14562 1220 aaKnown RBP18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 KCNG4Q8TDN1 519 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 KAZALD1Q96I82 304 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 ADAMTS13Q76LX8 1427 aa18.68■□□□□ 0.58
PDZRN3-201ENST00000263666 SNAP23O00161 211 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 HAUS7Q99871 368 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 GOLPH3LQ9H4A5 285 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 USP31Q70CQ4 1352 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 PREX1Q8TCU6 1659 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 FGAP02671 866 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 STAMQ92783 540 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 INCENPQ9NQS7 918 aa18.67■□□□□ 0.58
PDZRN3-201ENST00000263666 ANKRD18BA2A2Z9 1011 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 EPB41L2O43491 1005 aaKnown RBP18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 ARHGAP29Q52LW3 1261 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 PPFIBP1Q86W92 1011 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 LRRC8AQ8IWT6 810 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 COPRSQ9NQ92 184 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 KCNJ14Q9UNX9 436 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 M0R2C6 588 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 GSDMDP57764 484 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 PNOCQ13519 176 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 CCDC102BQ68D86 513 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 GTF2F1P35269 517 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 SLU7O95391 586 aaKnown RBP18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 SSRP1Q08945 709 aaKnown RBP18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 TMCO3Q6UWJ1 677 aa18.66■□□□□ 0.58
PDZRN3-201ENST00000263666 MAST3O60307 1309 aa18.65■□□□□ 0.58
PDZRN3-201ENST00000263666 PFKFB2O60825 505 aa18.65■□□□□ 0.58
PDZRN3-201ENST00000263666 CTDSPL2Q05D32 466 aa18.65■□□□□ 0.58
PDZRN3-201ENST00000263666 NACAP1Q9BZK3 213 aa18.65■□□□□ 0.58
PDZRN3-201ENST00000263666 ANO1Q5XXA6 986 aa18.65■□□□□ 0.58
PDZRN3-201ENST00000263666 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
PDZRN3-201ENST00000263666 TSR1Q2NL82 804 aaKnown RBP18.65■□□□□ 0.58
PDZRN3-201ENST00000263666 DNAJC10Q8IXB1 793 aa18.64■□□□□ 0.58
PDZRN3-201ENST00000263666 KIF20BQ96Q89 1820 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 COBLO75128 1261 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 CBFA2T2O43439 604 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 NEMFO60524 1076 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 MTX1Q13505 466 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 LZTFL1Q9NQ48 299 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 HELLSQ9NRZ9 838 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 PCDH11XQ9BZA7 1347 aa18.64■□□□□ 0.57
PDZRN3-201ENST00000263666 PCDH11YQ9BZA8 1340 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms