RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 A0A1B0GUL7 405 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 SLC27A2O14975 620 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 PDCP20941 246 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 CHAF1AQ13111 956 aaPredicted RBP20■□□□□ 0.79
FOXA1-201ENST00000250448 ERFEQ4G0M1 354 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 RC3H1Q5TC82 1133 aaKnown RBP20■□□□□ 0.79
FOXA1-201ENST00000250448 ZNF772Q68DY9 489 aaPredicted RBP20■□□□□ 0.79
FOXA1-201ENST00000250448 CEP126Q9P2H0 1117 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 ZNF831Q5JPB2 1677 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 MYH3P11055 1940 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 CHGBP05060 677 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 C3orf67Q6ZVT6 689 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 LY75O60449 1722 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 ZPR1O75312 459 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 ADORA1P30542 326 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
FOXA1-201ENST00000250448 AK7Q96M32 723 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 CNNM1Q9NRU3 951 aa19.99■□□□□ 0.79
FOXA1-201ENST00000250448 TAF1LQ8IZX4 1826 aa19.98■□□□□ 0.79
FOXA1-201ENST00000250448 SNRKQ9NRH2 765 aa19.98■□□□□ 0.79
FOXA1-201ENST00000250448 NARFQ9UHQ1 456 aa19.98■□□□□ 0.79
FOXA1-201ENST00000250448 CIAO1O76071 339 aa19.98■□□□□ 0.79
FOXA1-201ENST00000250448 FAM173BQ6P4H8 233 aa19.98■□□□□ 0.79
FOXA1-201ENST00000250448 CAMK4Q16566 473 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 METTL24Q5JXM2 366 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 BCORQ6W2J9 1755 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 SNAP23O00161 211 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 COL9A3Q14050 684 aaPredicted RBP19.97■□□□□ 0.79
FOXA1-201ENST00000250448 BLOC1S2Q6QNY1 142 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 RIOK3O14730 519 aaKnown RBP19.97■□□□□ 0.79
FOXA1-201ENST00000250448 PTGS1P23219 599 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 ANKRD1Q15327 319 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 CLEC4GQ6UXB4 293 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 LUZP1Q86V48 1076 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 FSD1Q9BTV5 496 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 PRDM10Q9NQV6 1147 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 RIPOR2Q9Y4F9 1068 aa19.97■□□□□ 0.79
FOXA1-201ENST00000250448 GTF2E1P29083 439 aaPredicted RBP19.96■□□□□ 0.79
FOXA1-201ENST00000250448 SCAND2PQ9GZW5 306 aaPredicted RBP19.96■□□□□ 0.79
FOXA1-201ENST00000250448 A0A0D9SFI3 127 aa19.96■□□□□ 0.79
FOXA1-201ENST00000250448 RNF20Q5VTR2 975 aa19.96■□□□□ 0.79
FOXA1-201ENST00000250448 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
FOXA1-201ENST00000250448 ZNF609O15014 1411 aa19.95■□□□□ 0.79
FOXA1-201ENST00000250448 ATP5JP18859 108 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 RPS6KB1P23443 525 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 RFC4P35249 363 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
FOXA1-201ENST00000250448 DACT1Q9NYF0 836 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 MED23Q9ULK4 1368 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 TRAPPC3LQ5T215 181 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 CKAP2LQ8IYA6 745 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 SPATA32Q96LK8 384 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 TCEANC2Q96MN5 208 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 CBX8Q9HC52 389 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 DDX19AQ9NUU7 478 aaKnown RBP19.95■□□□□ 0.78
FOXA1-201ENST00000250448 RIC1Q4ADV7 1423 aa19.95■□□□□ 0.78
FOXA1-201ENST00000250448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.94■□□□□ 0.78
FOXA1-201ENST00000250448 GOLGA6L4A6NEF3 574 aa19.94■□□□□ 0.78
FOXA1-201ENST00000250448 ANO6Q4KMQ2 910 aa19.94■□□□□ 0.78
FOXA1-201ENST00000250448 PROM2Q8N271 834 aa19.94■□□□□ 0.78
FOXA1-201ENST00000250448 ALDH8A1Q9H2A2 487 aaPredicted RBP19.94■□□□□ 0.78
FOXA1-201ENST00000250448 DDX60Q8IY21 1712 aaKnown RBP19.94■□□□□ 0.78
FOXA1-201ENST00000250448 SLFNL1Q499Z3 407 aa19.94■□□□□ 0.78
FOXA1-201ENST00000250448 SETDB2Q96T68 719 aa19.94■□□□□ 0.78
FOXA1-201ENST00000250448 RXRBP28702 533 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 TOB2Q14106 344 aaPredicted RBP19.93■□□□□ 0.78
FOXA1-201ENST00000250448 PPP4R3BQ5MIZ7 849 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 XAGE2Q96GT9 111 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 CLSTN2Q9H4D0 955 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
FOXA1-201ENST00000250448 COL4A1P02462 1669 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 ABCC12Q96J65 1359 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 TAF5LO75529 589 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 GORABQ5T7V8 394 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 RBM43Q6ZSC3 357 aaKnown RBP19.93■□□□□ 0.78
FOXA1-201ENST00000250448 LEO1Q8WVC0 666 aaPredicted RBP19.93■□□□□ 0.78
FOXA1-201ENST00000250448 NBPF5PQ86XG9 351 aaPredicted RBP19.93■□□□□ 0.78
FOXA1-201ENST00000250448 TAF6LQ9Y6J9 622 aa19.93■□□□□ 0.78
FOXA1-201ENST00000250448 TAF1P21675 1872 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 GOLIM4O00461 696 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 TFIP11Q9UBB9 837 aaKnown RBP19.92■□□□□ 0.78
FOXA1-201ENST00000250448 ATP2B3Q16720 1220 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 TXNRD1Q16881 649 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 POTEAQ6S8J7 498 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 PI16Q6UXB8 463 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 CCDC186Q7Z3E2 898 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 GPR108Q9NPR9 543 aa19.92■□□□□ 0.78
FOXA1-201ENST00000250448 SCN7AQ01118 1682 aa19.91■□□□□ 0.78
FOXA1-201ENST00000250448 CCDC152Q4G0S7 254 aa19.91■□□□□ 0.78
FOXA1-201ENST00000250448 PDCL2Q8N4E4 241 aa19.91■□□□□ 0.78
FOXA1-201ENST00000250448 HMG20BQ9P0W2 317 aa19.91■□□□□ 0.78
FOXA1-201ENST00000250448 CTIFO43310 598 aaKnown RBP19.91■□□□□ 0.78
FOXA1-201ENST00000250448 ZNF75DP51815 510 aa19.91■□□□□ 0.78
FOXA1-201ENST00000250448 SCARF1Q14162 830 aa19.91■□□□□ 0.78
FOXA1-201ENST00000250448 TDRD7Q8NHU6 1098 aaKnown RBP19.91■□□□□ 0.78
FOXA1-201ENST00000250448 ANKRD7Q92527 254 aa19.91■□□□□ 0.78
FOXA1-201ENST00000250448 MPHOSPH8Q99549 860 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms