RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 IQSEC3Q9UPP2 1182 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-201ENST00000230480 G3V3G9 751 aa17.09■□□□□ 0.33
VEGFA-201ENST00000230480 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
VEGFA-201ENST00000230480 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
VEGFA-201ENST00000230480 ZNF804AQ7Z570 1209 aa17.09■□□□□ 0.33
VEGFA-201ENST00000230480 LPIN2Q92539 896 aa17.09■□□□□ 0.33
VEGFA-201ENST00000230480 TRPM7Q96QT4 1865 aa17.09■□□□□ 0.33
VEGFA-201ENST00000230480 H7C1D1 291 aa17.08■□□□□ 0.32
VEGFA-201ENST00000230480 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.32
VEGFA-201ENST00000230480 CST9Q5W186 159 aa17.08■□□□□ 0.32
VEGFA-201ENST00000230480 CEP126Q9P2H0 1117 aa17.08■□□□□ 0.32
VEGFA-201ENST00000230480 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
VEGFA-201ENST00000230480 AKAP11Q9UKA4 1901 aa17.08■□□□□ 0.32
VEGFA-201ENST00000230480 ZBTB22O15209 634 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 PHKA1P46020 1223 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
VEGFA-201ENST00000230480 ATP2B3Q16720 1220 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 NBPF9Q3BBW0 867 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
VEGFA-201ENST00000230480 GLIS2Q9BZE0 524 aaPredicted RBP17.07■□□□□ 0.32
VEGFA-201ENST00000230480 MYOZ2Q9NPC6 264 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
VEGFA-201ENST00000230480 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
VEGFA-201ENST00000230480 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
VEGFA-201ENST00000230480 SCAF8Q9UPN6 1271 aaKnown RBP17.06■□□□□ 0.32
VEGFA-201ENST00000230480 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
VEGFA-201ENST00000230480 WNT10BO00744 389 aa17.05■□□□□ 0.32
VEGFA-201ENST00000230480 MS4A1P11836 297 aa17.05■□□□□ 0.32
VEGFA-201ENST00000230480 SCARF1Q14162 830 aa17.05■□□□□ 0.32
VEGFA-201ENST00000230480 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
VEGFA-201ENST00000230480 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
VEGFA-201ENST00000230480 SLC5A1P13866 664 aa17.04■□□□□ 0.32
VEGFA-201ENST00000230480 CCDC102BQ68D86 513 aa17.04■□□□□ 0.32
VEGFA-201ENST00000230480 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
VEGFA-201ENST00000230480 MYO5AQ9Y4I1 1855 aaKnown RBP17.03■□□□□ 0.32
VEGFA-201ENST00000230480 MYO3BQ8WXR4 1341 aa17.03■□□□□ 0.32
VEGFA-201ENST00000230480 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
VEGFA-201ENST00000230480 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
VEGFA-201ENST00000230480 MTMR14Q8NCE2 650 aa17.03■□□□□ 0.32
VEGFA-201ENST00000230480 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
VEGFA-201ENST00000230480 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
VEGFA-201ENST00000230480 ADM5C9JUS6 153 aa17.02■□□□□ 0.32
VEGFA-201ENST00000230480 MFSD14BQ5SR56 506 aa17.02■□□□□ 0.32
VEGFA-201ENST00000230480 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-201ENST00000230480 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-201ENST00000230480 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
VEGFA-201ENST00000230480 F8W031 263 aaPredicted RBP17.01■□□□□ 0.31
VEGFA-201ENST00000230480 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.31
VEGFA-201ENST00000230480 RASGRF1Q13972 1273 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 TNNI3KQ59H18 835 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 ANGEL2Q5VTE6 544 aaKnown RBP17.01■□□□□ 0.31
VEGFA-201ENST00000230480 ZNF384Q8TF68 577 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 GPR108Q9NPR9 543 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
VEGFA-201ENST00000230480 GGA3Q9NZ52 723 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 EXOC6BQ9Y2D4 811 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 FPGT-TNNI3KV9GXZ4 949 aa17.01■□□□□ 0.31
VEGFA-201ENST00000230480 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
VEGFA-201ENST00000230480 PI16Q6UXB8 463 aa17■□□□□ 0.31
VEGFA-201ENST00000230480 CDC37L1Q7L3B6 337 aa17■□□□□ 0.31
VEGFA-201ENST00000230480 DBNDD2Q9BQY9 259 aa17■□□□□ 0.31
VEGFA-201ENST00000230480 SPDYE2BA6NHP3 402 aa16.99■□□□□ 0.31
VEGFA-201ENST00000230480 SPDYE6P0CI01 402 aa16.99■□□□□ 0.31
VEGFA-201ENST00000230480 CFAP100Q494V2 611 aa16.99■□□□□ 0.31
VEGFA-201ENST00000230480 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
VEGFA-201ENST00000230480 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
VEGFA-201ENST00000230480 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
VEGFA-201ENST00000230480 PRAMEF18Q5VWM3 479 aa16.98■□□□□ 0.31
VEGFA-201ENST00000230480 KRT26Q7Z3Y9 468 aa16.98■□□□□ 0.31
VEGFA-201ENST00000230480 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-201ENST00000230480 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
VEGFA-201ENST00000230480 TTF2Q9UNY4 1162 aaKnown RBP16.98■□□□□ 0.31
VEGFA-201ENST00000230480 PITPNM2Q9BZ72 1349 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 TMEM88BA6NKF7 163 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 ARID4AP29374 1257 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-201ENST00000230480 PRDX5P30044 214 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 MCAMP43121 646 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 MMP14P50281 582 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 VPS37DQ86XT2 251 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 AKAP2Q9Y2D5 859 aa16.97■□□□□ 0.31
VEGFA-201ENST00000230480 PCNTO95613 3336 aa16.96■□□□□ 0.31
VEGFA-201ENST00000230480 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.31
VEGFA-201ENST00000230480 CRKP46108 304 aa16.96■□□□□ 0.31
VEGFA-201ENST00000230480 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
VEGFA-201ENST00000230480 OGFOD1Q8N543 542 aa16.96■□□□□ 0.31
VEGFA-201ENST00000230480 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
VEGFA-201ENST00000230480 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
VEGFA-201ENST00000230480 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-201ENST00000230480 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.3
VEGFA-201ENST00000230480 SEMA3EO15041 775 aa16.95■□□□□ 0.3
VEGFA-201ENST00000230480 CDAN1Q8IWY9 1227 aa16.95■□□□□ 0.3
VEGFA-201ENST00000230480 TBC1D22AQ8WUA7 517 aa16.95■□□□□ 0.3
VEGFA-201ENST00000230480 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
VEGFA-201ENST00000230480 KLRG1Q96E93 195 aa16.95■□□□□ 0.3
VEGFA-201ENST00000230480 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms