RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 POTEJP0CG39 1038 aa29.01■■■□□ 2.23
HOMER3-201ENST00000221222 STRIP1Q5VSL9 837 aa29.01■■■□□ 2.23
HOMER3-201ENST00000221222 USP17L1Q7RTZ2 530 aa29.01■■■□□ 2.23
HOMER3-201ENST00000221222 CCDC8Q9H0W5 538 aaPredicted RBP29.01■■■□□ 2.23
HOMER3-201ENST00000221222 GNL3LQ9NVN8 582 aaKnown RBP29.01■■■□□ 2.23
HOMER3-201ENST00000221222 TLR7Q9NYK1 1049 aaKnown RBP29.01■■■□□ 2.23
HOMER3-201ENST00000221222 FAM205AQ6ZU69 1335 aa29■■■□□ 2.23
HOMER3-201ENST00000221222 PSMD14O00487 310 aa29■■■□□ 2.23
HOMER3-201ENST00000221222 VIL1P09327 827 aaKnown RBP29■■■□□ 2.23
HOMER3-201ENST00000221222 GORABQ5T7V8 394 aa29■■■□□ 2.23
HOMER3-201ENST00000221222 SEMA3EO15041 775 aa28.99■■■□□ 2.23
HOMER3-201ENST00000221222 TTLL5Q6EMB2 1281 aa28.99■■■□□ 2.23
HOMER3-201ENST00000221222 IFIT2P09913 472 aaKnown RBP28.98■■■□□ 2.23
HOMER3-201ENST00000221222 GTF2IP78347 998 aa28.98■■■□□ 2.23
HOMER3-201ENST00000221222 DACT2Q5SW24 774 aa28.98■■■□□ 2.23
HOMER3-201ENST00000221222 IQSEC3Q9UPP2 1182 aaPredicted RBP28.98■■■□□ 2.23
HOMER3-201ENST00000221222 GJA3Q9Y6H8 435 aa28.98■■■□□ 2.23
HOMER3-201ENST00000221222 ARID4AP29374 1257 aaPredicted RBP28.97■■■□□ 2.23
HOMER3-201ENST00000221222 CCDC158Q5M9N0 1113 aa28.97■■■□□ 2.23
HOMER3-201ENST00000221222 L3MBTL3Q96JM7 780 aaPredicted RBP28.97■■■□□ 2.23
HOMER3-201ENST00000221222 ZNF512BQ96KM6 892 aaPredicted RBP28.97■■■□□ 2.23
HOMER3-201ENST00000221222 COL1A1P02452 1464 aaPredicted RBP28.96■■■□□ 2.23
HOMER3-201ENST00000221222 FRAT2O75474 233 aaPredicted RBP28.96■■■□□ 2.23
HOMER3-201ENST00000221222 ANKRD45Q5TZF3 282 aa28.96■■■□□ 2.23
HOMER3-201ENST00000221222 UQCRFS1P1P0C7P4 283 aa28.95■■■□□ 2.22
HOMER3-201ENST00000221222 FKBP1AP62942 108 aaKnown RBP28.95■■■□□ 2.22
HOMER3-201ENST00000221222 IFFO2Q5TF58 517 aa28.95■■■□□ 2.22
HOMER3-201ENST00000221222 CHADLQ6NUI6 762 aa28.95■■■□□ 2.22
HOMER3-201ENST00000221222 RSBN1LQ6PCB5 846 aaPredicted RBP28.95■■■□□ 2.22
HOMER3-201ENST00000221222 AKAP11Q9UKA4 1901 aa28.95■■■□□ 2.22
HOMER3-201ENST00000221222 PDS5AQ29RF7 1337 aaKnown RBP28.95■■■□□ 2.22
HOMER3-201ENST00000221222 SCN4AP35499 1836 aa28.94■■■□□ 2.22
HOMER3-201ENST00000221222 RPS12P25398 132 aaKnown RBP28.94■■■□□ 2.22
HOMER3-201ENST00000221222 DENND2AQ9ULE3 1009 aa28.94■■■□□ 2.22
HOMER3-201ENST00000221222 MYO3BQ8WXR4 1341 aa28.94■■■□□ 2.22
HOMER3-201ENST00000221222 IQCA1LA6NCM1 817 aa28.93■■■□□ 2.22
HOMER3-201ENST00000221222 RASGRF1Q13972 1273 aa28.93■■■□□ 2.22
HOMER3-201ENST00000221222 TTC39AQ5SRH9 613 aa28.93■■■□□ 2.22
HOMER3-201ENST00000221222 AGBL3Q8NEM8 1001 aa28.93■■■□□ 2.22
HOMER3-201ENST00000221222 FBXW7Q969H0 707 aa28.93■■■□□ 2.22
HOMER3-201ENST00000221222 GMLQ99445 158 aa28.93■■■□□ 2.22
HOMER3-201ENST00000221222 ZBTB47Q9UFB7 747 aaPredicted RBP28.93■■■□□ 2.22
HOMER3-201ENST00000221222 GMPSP49915 693 aaPredicted RBP28.92■■■□□ 2.22
HOMER3-201ENST00000221222 BCL11AQ9H165 835 aa28.92■■■□□ 2.22
HOMER3-201ENST00000221222 TAF1DQ9H5J8 278 aaPredicted RBP28.92■■■□□ 2.22
HOMER3-201ENST00000221222 ZBTB12Q9Y330 459 aaPredicted RBP28.92■■■□□ 2.22
HOMER3-201ENST00000221222 NUCB1Q02818 461 aa28.91■■■□□ 2.22
HOMER3-201ENST00000221222 EAPPQ56P03 285 aaPredicted RBP28.91■■■□□ 2.22
HOMER3-201ENST00000221222 JMYQ8N9B5 988 aa28.91■■■□□ 2.22
HOMER3-201ENST00000221222 TBC1D22AQ8WUA7 517 aa28.91■■■□□ 2.22
HOMER3-201ENST00000221222 DPF2Q92785 391 aa28.91■■■□□ 2.22
HOMER3-201ENST00000221222 JAG2Q9Y219 1238 aa28.91■■■□□ 2.22
HOMER3-201ENST00000221222 MCAMP43121 646 aa28.9■■■□□ 2.22
HOMER3-201ENST00000221222 SCNN1DP51172 638 aa28.9■■■□□ 2.22
HOMER3-201ENST00000221222 CHAF1AQ13111 956 aaPredicted RBP28.9■■■□□ 2.22
HOMER3-201ENST00000221222 B4GALNT3Q6L9W6 998 aa28.9■■■□□ 2.22
HOMER3-201ENST00000221222 CERS5Q8N5B7 392 aa28.9■■■□□ 2.22
HOMER3-201ENST00000221222 WDR66Q8TBY9 1149 aa28.9■■■□□ 2.22
HOMER3-201ENST00000221222 MXD3Q9BW11 206 aa28.9■■■□□ 2.22
HOMER3-201ENST00000221222 HMG20BQ9P0W2 317 aa28.9■■■□□ 2.22
HOMER3-201ENST00000221222 SCARF1Q14162 830 aa28.89■■■□□ 2.22
HOMER3-201ENST00000221222 CHD1LQ86WJ1 897 aa28.89■■■□□ 2.22
HOMER3-201ENST00000221222 MFSD14BQ5SR56 506 aa28.88■■■□□ 2.21
HOMER3-201ENST00000221222 SPATA5Q8NB90 893 aa28.88■■■□□ 2.21
HOMER3-201ENST00000221222 GPRC5DQ9NZD1 345 aa28.88■■■□□ 2.21
HOMER3-201ENST00000221222 HACL1Q9UJ83 578 aa28.88■■■□□ 2.21
HOMER3-201ENST00000221222 SALL1Q9NSC2 1324 aa28.88■■■□□ 2.21
HOMER3-201ENST00000221222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.88■■■□□ 2.21
HOMER3-201ENST00000221222 LDHDQ86WU2 507 aa28.87■■■□□ 2.21
HOMER3-201ENST00000221222 CCDC136Q96JN2 1154 aa28.87■■■□□ 2.21
HOMER3-201ENST00000221222 LNPKQ9C0E8 428 aa28.87■■■□□ 2.21
HOMER3-201ENST00000221222 SALL3Q9BXA9 1300 aa28.87■■■□□ 2.21
HOMER3-201ENST00000221222 ATP5JP18859 108 aa28.86■■■□□ 2.21
HOMER3-201ENST00000221222 LMOD1P29536 600 aaPredicted RBP28.86■■■□□ 2.21
HOMER3-201ENST00000221222 PI16Q6UXB8 463 aa28.86■■■□□ 2.21
HOMER3-201ENST00000221222 CENPQQ7L2Z9 268 aaPredicted RBP28.86■■■□□ 2.21
HOMER3-201ENST00000221222 GPATCH3Q96I76 525 aa28.86■■■□□ 2.21
HOMER3-201ENST00000221222 ECHDC1Q9NTX5 307 aa28.86■■■□□ 2.21
HOMER3-201ENST00000221222 CLEC11AQ9Y240 323 aa28.86■■■□□ 2.21
HOMER3-201ENST00000221222 SUGT1Q9Y2Z0 365 aa28.86■■■□□ 2.21
HOMER3-201ENST00000221222 EPHX2P34913 555 aa28.85■■■□□ 2.21
HOMER3-201ENST00000221222 MMP14P50281 582 aa28.85■■■□□ 2.21
HOMER3-201ENST00000221222 OTUD7AQ8TE49 926 aaPredicted RBP28.85■■■□□ 2.21
HOMER3-201ENST00000221222 PPP4R2Q9NY27 417 aa28.85■■■□□ 2.21
HOMER3-201ENST00000221222 CNOT7Q9UIV1 285 aaKnown RBP28.85■■■□□ 2.21
HOMER3-201ENST00000221222 TTC41PQ6P2S7 1318 aa28.84■■■□□ 2.21
HOMER3-201ENST00000221222 USP17L8P0C7I0 530 aa28.84■■■□□ 2.21
HOMER3-201ENST00000221222 ZNF280AP59817 542 aaPredicted RBP28.84■■■□□ 2.21
HOMER3-201ENST00000221222 MICALL2Q8IY33 904 aa28.84■■■□□ 2.21
HOMER3-201ENST00000221222 ZGPATQ8N5A5 531 aaKnown RBP28.84■■■□□ 2.21
HOMER3-201ENST00000221222 MX1P20591 662 aa28.83■■■□□ 2.21
HOMER3-201ENST00000221222 EPS15P42566 896 aa28.83■■■□□ 2.21
HOMER3-201ENST00000221222 KIAA0825Q8IV33 1275 aa28.83■■■□□ 2.21
HOMER3-201ENST00000221222 GRIK5Q16478 980 aa28.82■■■□□ 2.2
HOMER3-201ENST00000221222 SNRKQ9NRH2 765 aa28.82■■■□□ 2.2
HOMER3-201ENST00000221222 MKRN1Q9UHC7 482 aaKnown RBP28.82■■■□□ 2.2
HOMER3-201ENST00000221222 SHTN1A0MZ66 631 aa28.81■■■□□ 2.2
HOMER3-201ENST00000221222 H7C1D1 291 aa28.81■■■□□ 2.2
HOMER3-201ENST00000221222 ZAP70P43403 619 aa28.81■■■□□ 2.2
HOMER3-201ENST00000221222 STAP2Q9UGK3 403 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms