RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 SMC2O95347 1197 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 TPM1P09493 284 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 RAD51AP2Q09MP3 1159 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 Q6ZUG5 572 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 UBE3BQ7Z3V4 1068 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 ZNF589Q86UQ0 364 aaPredicted RBP22.85■■□□□ 1.25
HOXA11-201ENST00000006015 XPO4Q9C0E2 1151 aaKnown RBP22.85■■□□□ 1.25
HOXA11-201ENST00000006015 PRDM11Q9NQV5 511 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 TAF5LO75529 589 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 TOM1L2Q6ZVM7 507 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 USP28Q96RU2 1077 aa22.85■■□□□ 1.25
HOXA11-201ENST00000006015 HOMER1Q86YM7 354 aa22.84■■□□□ 1.25
HOXA11-201ENST00000006015 FTOQ9C0B1 505 aaKnown RBP eCLIP22.84■■□□□ 1.25
HOXA11-201ENST00000006015 ABCC6O95255 1503 aa22.84■■□□□ 1.25
HOXA11-201ENST00000006015 LMTK3Q96Q04 1460 aa22.84■■□□□ 1.25
HOXA11-201ENST00000006015 MNS1Q8NEH6 495 aa22.84■■□□□ 1.25
HOXA11-201ENST00000006015 IFNKQ9P0W0 207 aa22.84■■□□□ 1.25
HOXA11-201ENST00000006015 FEZ2Q9UHY8 353 aaPredicted RBP22.84■■□□□ 1.25
HOXA11-201ENST00000006015 SCRN1Q12765 414 aa22.83■■□□□ 1.25
HOXA11-201ENST00000006015 ZRSR1Q15695 479 aaKnown RBP22.83■■□□□ 1.25
HOXA11-201ENST00000006015 ME1P48163 572 aa22.83■■□□□ 1.24
HOXA11-201ENST00000006015 MRPS27Q92552 414 aaKnown RBP22.83■■□□□ 1.24
HOXA11-201ENST00000006015 EDC3Q96F86 508 aaKnown RBP22.83■■□□□ 1.24
HOXA11-201ENST00000006015 UBXN6Q9BZV1 441 aa22.83■■□□□ 1.24
HOXA11-201ENST00000006015 PFKFB2O60825 505 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 TADA3O75528 432 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 CCDC158Q5M9N0 1113 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 FMR1NBQ8N0W7 255 aaPredicted RBP22.82■■□□□ 1.24
HOXA11-201ENST00000006015 NDUFB9Q9Y6M9 179 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 EFCAB8A8MWE9 144 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 NBPF26B4DH59 902 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 NBPF14Q5TI25 921 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 NBPF10Q6P3W6 841 aaKnown RBP22.82■■□□□ 1.24
HOXA11-201ENST00000006015 NBPF15Q8N660 670 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 NSUN7Q8NE18 718 aaKnown RBP22.82■■□□□ 1.24
HOXA11-201ENST00000006015 DNAI1Q9UI46 699 aa22.82■■□□□ 1.24
HOXA11-201ENST00000006015 A0A087WZG4 1122 aa22.81■■□□□ 1.24
HOXA11-201ENST00000006015 GPS2Q13227 327 aa22.81■■□□□ 1.24
HOXA11-201ENST00000006015 GORABQ5T7V8 394 aa22.81■■□□□ 1.24
HOXA11-201ENST00000006015 SYTL4Q96C24 671 aaPredicted RBP22.81■■□□□ 1.24
HOXA11-201ENST00000006015 SDF4Q9BRK5 362 aa22.81■■□□□ 1.24
HOXA11-201ENST00000006015 TRIM34Q9BYJ4 488 aa22.81■■□□□ 1.24
HOXA11-201ENST00000006015 POLR3GO15318 223 aaPredicted RBP22.8■■□□□ 1.24
HOXA11-201ENST00000006015 NEK11Q8NG66 645 aa22.8■■□□□ 1.24
HOXA11-201ENST00000006015 FBXW7Q969H0 707 aa22.8■■□□□ 1.24
HOXA11-201ENST00000006015 U3KPZ7 1027 aaPredicted RBP22.8■■□□□ 1.24
HOXA11-201ENST00000006015 ZCRB1Q8TBF4 217 aaKnown RBP22.8■■□□□ 1.24
HOXA11-201ENST00000006015 TRERF1Q96PN7 1200 aa22.8■■□□□ 1.24
HOXA11-201ENST00000006015 CPDO75976 1380 aa22.8■■□□□ 1.24
HOXA11-201ENST00000006015 PTPN12Q05209 780 aaKnown RBP22.79■■□□□ 1.24
HOXA11-201ENST00000006015 LRRFIP1Q32MZ4 808 aaKnown RBP22.79■■□□□ 1.24
HOXA11-201ENST00000006015 DPCR1Q3MIW9 517 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 TTLL7Q6ZT98 887 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 STRN4Q9NRL3 753 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 KIAA1468Q9P260 1216 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 A0A1W2PQ27 194 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 A0A1W2PQ64 194 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 A0A1W2PQD8 194 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 PTPDC1A2A3K4 754 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 A1BGP04217 495 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 RFX5P48382 616 aaPredicted RBP22.79■■□□□ 1.24
HOXA11-201ENST00000006015 TFCP2Q12800 502 aa22.79■■□□□ 1.24
HOXA11-201ENST00000006015 ERCC4Q92889 916 aaPredicted RBP22.79■■□□□ 1.24
HOXA11-201ENST00000006015 CCDC9Q9Y3X0 531 aaKnown RBP22.79■■□□□ 1.24
HOXA11-201ENST00000006015 MRC1P22897 1456 aa22.78■■□□□ 1.24
HOXA11-201ENST00000006015 RFX7Q2KHR2 1363 aa22.78■■□□□ 1.24
HOXA11-201ENST00000006015 CHGBP05060 677 aa22.78■■□□□ 1.24
HOXA11-201ENST00000006015 ADALQ6DHV7 355 aa22.78■■□□□ 1.24
HOXA11-201ENST00000006015 WDR17Q8IZU2 1322 aa22.77■■□□□ 1.24
HOXA11-201ENST00000006015 FOSBP53539 338 aa22.77■■□□□ 1.24
HOXA11-201ENST00000006015 TRIM65Q6PJ69 517 aa22.77■■□□□ 1.24
HOXA11-201ENST00000006015 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
HOXA11-201ENST00000006015 COL15A1P39059 1388 aa22.77■■□□□ 1.24
HOXA11-201ENST00000006015 URI1O94763 535 aaPredicted RBP22.77■■□□□ 1.23
HOXA11-201ENST00000006015 HMGB1P09429 215 aaKnown RBP22.77■■□□□ 1.23
HOXA11-201ENST00000006015 OAS2P29728 719 aaKnown RBP22.77■■□□□ 1.23
HOXA11-201ENST00000006015 SMARCE1Q969G3 411 aa22.77■■□□□ 1.23
HOXA11-201ENST00000006015 PCDHA7Q9UN72 937 aa22.77■■□□□ 1.23
HOXA11-201ENST00000006015 SEC31AO94979 1220 aaKnown RBP22.76■■□□□ 1.23
HOXA11-201ENST00000006015 KRBA2Q6ZNG9 492 aa22.76■■□□□ 1.23
HOXA11-201ENST00000006015 DBNLQ9UJU6 430 aaKnown RBP22.76■■□□□ 1.23
HOXA11-201ENST00000006015 ZNF335Q9H4Z2 1342 aaPredicted RBP22.76■■□□□ 1.23
HOXA11-201ENST00000006015 CTDNEP1O95476 244 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 TBC1D8O95759 1140 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 EVCP57679 992 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 NLRP12P59046 1061 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 FCHSD1Q86WN1 690 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 PLBD2Q8NHP8 589 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 CARD6Q9BX69 1037 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 RTEL1Q9NZ71 1219 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 PARP3Q9Y6F1 533 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 CYP21A2P08686 494 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 CC2D1AQ6P1N0 951 aaPredicted RBP22.75■■□□□ 1.23
HOXA11-201ENST00000006015 LMBR1LQ6UX01 489 aa22.75■■□□□ 1.23
HOXA11-201ENST00000006015 LAMA4Q16363 1823 aa22.74■■□□□ 1.23
HOXA11-201ENST00000006015 ST5P78524 1137 aa22.74■■□□□ 1.23
HOXA11-201ENST00000006015 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
HOXA11-201ENST00000006015 ZBTB3Q9H5J0 574 aa22.74■■□□□ 1.23
HOXA11-201ENST00000006015 CWC15Q9P013 229 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms