RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Npc1l1Q6T3U4 1333 aa18.27■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Fads2p1Q0VAX3 487 aa18.27■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Apbb1Q9QXJ1 710 aa18.27■□□□□ 0.52
Ccdc88c-204ENSMUST00000223097 Irx3P81067 507 aa18.26■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 SpidrQ8BGX7 933 aa18.26■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ncoa5Q91W39 579 aaKnown RBP18.26■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Cd2apQ9JLQ0 637 aa18.26■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Fndc3c1Q6DFV6 1356 aa18.26■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Prl3d2F6R3P9 224 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Gas2l2Q5SSG4 860 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Map3k12Q60700 888 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Mapk4Q6P5G0 583 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Rab3gap1Q80UJ7 981 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Lrrc24Q8BHA1 521 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Amer2Q8CCJ4 672 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Tmc2Q8R4P4 888 aa18.25■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Mast3Q3U214 1321 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Gm13128L7MU96 475 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Klrg2Q3UM83 387 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ralbp1Q62172 648 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 CrkQ64010 304 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 NrdcQ8BHG1 1161 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Plcd4Q8K3R3 807 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Chmp3Q9CQ10 224 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Nfe2l3Q9WTM4 660 aa18.24■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Nup98Q6PFD9 1816 aaKnown RBP18.23■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Nectin2P32507 530 aa18.23■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ftl2P49945 183 aa18.23■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Plekhf1Q3TB82 279 aa18.23■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Lgr6Q3UVD5 967 aa18.23■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Tmem39bQ810L4 492 aa18.23■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Prss51A0A286YDY8 319 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Fam83bQ0VBM2 1012 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ddx55Q6ZPL9 600 aaKnown RBP18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Cnksr2Q80YA9 1032 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 MyocdQ8VIM5 935 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Stag1Q9D3E6 1258 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Il21rQ9JHX3 529 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Cry2Q9R194 592 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Irs4Q9Z0Y7 1216 aa18.22■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ccdc88aQ5SNZ0 1873 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Plbd2Q3TCN2 594 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Gm5592Q3V0A6 857 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Gm11437Q5QR91 290 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Adora1Q60612 326 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ces5aQ6AW46 575 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ccar1Q8CH18 1146 aaKnown RBP18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Sgpl1Q8R0X7 568 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Pcdhb5Q91XZ5 792 aa18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Ep400Q8CHI8 3072 aaKnown RBP18.21■□□□□ 0.51
Ccdc88c-204ENSMUST00000223097 Gm15262A0A140LIQ5 728 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Gxylt1Q3UHH8 404 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Spg7Q3ULF4 781 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Nlrp9bQ66X22 1003 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Ccdc60Q8C4J0 545 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Mbtps2Q8CHX6 515 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Tmod2Q9JKK7 351 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Bub1bQ9Z1S0 1052 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Letm1Q9Z2I0 738 aa18.2■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 CnpP16330 420 aa18.19■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Otud5Q3U2S4 566 aa18.19■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Mrs2Q5NCE8 434 aa18.19■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Tmco5bQ80X59 307 aa18.19■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 InsrrQ9WTL4 1300 aa18.19■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 CpdO89001 1377 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Ankrd63A2ARS0 390 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Pde8bE9Q4S1 865 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Phldb3E9QAF4 648 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Spata21Q8BHW6 681 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Zkscan8Q8BSL0 588 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Lca5lQ8C0X0 741 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Gbp7Q91Z40 638 aa18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Zc3h4Q6ZPZ3 1304 aaKnown RBP18.18■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Tbc1d8bA3KGB4 1114 aa18.17■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Clrn2B2RVW2 232 aa18.17■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Wdr66E9Q743 1299 aa18.17■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Cacnb3P54285 484 aa18.17■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Rad21Q61550 635 aaKnown RBP18.17■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Ero1bQ8R2E9 467 aa18.17■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Cyp2b10P12791 500 aa18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Gprin1Q3UNH4 932 aa18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Plekhm2Q80TQ5 1018 aa18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Phf20Q8BLG0 1010 aaKnown RBP18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Gjc2Q8BQU6 440 aa18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Rnf208Q8K0W3 265 aa18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Borcs6Q9D6W8 360 aa18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Plcg1Q62077 1302 aa18.16■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Dicer1Q8R418 1916 aa18.15■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Slc4a2P13808 1237 aaKnown RBP18.15■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Sept9Q80UG5 583 aa18.15■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Syne4Q8CII8 388 aa18.15■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Irx5Q9JKQ4 484 aa18.15■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Syt5Q9R0N5 386 aa18.15■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Syngap1F6SEU4 1340 aa18.15■□□□□ 0.5
Ccdc88c-204ENSMUST00000223097 Washc4Q3UMB9 1173 aa18.14■□□□□ 0.49
Ccdc88c-204ENSMUST00000223097 Ufl1Q8CCJ3 793 aaKnown RBP18.14■□□□□ 0.49
Ccdc88c-204ENSMUST00000223097 Zbtb9Q8CDC7 459 aa18.14■□□□□ 0.49
Ccdc88c-204ENSMUST00000223097 Anks4bQ8K3X6 423 aa18.14■□□□□ 0.49
Ccdc88c-204ENSMUST00000223097 Polr3glQ8R0C0 218 aa18.14■□□□□ 0.49
Ccdc88c-204ENSMUST00000223097 LratQ9JI60 231 aa18.14■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms