RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Ccdc38Q8CDN8 563 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Efhd1Q9D4J1 240 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Akap8Q9DBR0 687 aaKnown RBP13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Gm1993A6X8I0 212 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Prr29B1ARI9 187 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 SlxD3Z347 212 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Zkscan4Q5SZT6 480 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Ankrd49Q8VE42 238 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Kif17Q99PW8 1038 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Map7d1A2AJI0 846 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 PpardP35396 440 aa13.26□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Apol10bG3X9K7 334 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 SsbP32067 415 aaKnown RBP13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 PicalmQ7M6Y3 660 aaKnown RBP13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Ints8Q80V86 995 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Psmd6Q99JI4 389 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 BrapQ99MP8 591 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Six6os1Q9CTN5 574 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Mlh3A0A1Y7VMP7 1443 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Abcb4P21440 1276 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Pdzrn3Q69ZS0 1063 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Krt77Q6IFZ6 572 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Sh2d4bA6X942 431 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Brd1E9PZ26 1189 aaKnown RBP13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Kif5cP28738 956 aaKnown RBP13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Olfm5Q8BU90 496 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Bloc1s4Q8VED2 215 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Sec63Q8VHE0 760 aaKnown RBP13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 S100bP50114 92 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 RestQ8VIG1 1082 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Lztfl1Q9JHQ5 299 aa13.25□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Parp1P11103 1013 aaKnown RBP13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Eps15P42567 897 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Leo1Q5XJE5 667 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Mpp4Q6P7F1 635 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Bicc1Q99MQ1 977 aaKnown RBP13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 NapaQ9DB05 295 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Gm10093D3YYI8 482 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Hdac1O09106 482 aaKnown RBP13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Ubash3aQ3V3E1 624 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Tcp11l1Q8BTG3 509 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Pde3aQ9Z0X4 1141 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Akr1b8P45377 316 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Rpl13P47963 211 aaKnown RBP13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Aldh8a1Q8BH00 487 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Stoml1Q8CI66 399 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 FibpQ9JI19 357 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Mapkbp1Q6NS57 1503 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Catsper2A2ARP9 588 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Eif4a2P10630 407 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 VimP20152 466 aaKnown RBP13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Pls1Q3V0K9 630 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Slc38a10Q5I012 1090 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Bst2Q8R2Q8 172 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 SynmQ70IV5 1561 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Abcc4E9Q236 1325 aa13.24□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Zfp397Q7TNK4 527 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Vat1lQ80TB8 417 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Gdpd2Q9ESM6 539 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Mybl2P48972 704 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Tubb4bP68372 445 aaKnown RBP13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Ddb1Q3U1J4 1140 aaKnown RBP13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Gm5934D3Z4U6 212 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Gm2030D3Z7C4 212 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Slc27a3O88561 667 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Vps54Q5SPW0 977 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Bank1Q80VH0 783 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 HhatQ8BMT9 499 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Ndufa8Q9DCJ5 172 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 AqrQ8CFQ3 1481 aaKnown RBP13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Rapgef6Q5NCJ1 1609 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 NmiO35309 314 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Pcdhb5Q91XZ5 792 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Tab2Q99K90 693 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Kifap3P70188 793 aa13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Nap1l4Q78ZA7 375 aaKnown RBP13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Hexim1Q8R409 356 aaKnown RBP13.23□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Atp10dQ8K2X1 1416 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Sh3tc1G3X9F6 1346 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Trap1aP19473 224 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Rfc1P35601 1131 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Emilin2Q8K482 1074 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 AdpgkQ8VDL4 496 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Ier5O89113 308 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Gadd45bP22339 160 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 WaplQ65Z40 1200 aaKnown RBP13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Tsr2Q8C8T8 191 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Arfgap2Q99K28 520 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 RtcbQ99LF4 505 aaKnown RBP13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Dnajc10Q9DC23 793 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Skor2A7M7C7 1008 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Snrpa1P57784 255 aaKnown RBP13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Trim6Q8BGE7 488 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Rassf2Q8BMS9 326 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Nfil3O08750 462 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Pdrg1P59048 133 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 SpopQ6ZWS8 374 aa13.22□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Tspyl1O88852 379 aa13.21□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Nop9Q8BMC4 636 aaKnown RBP13.21□□□□□ -0.29
Scn8a-208ENSMUST00000200963 Ccdc14Q8K2J4 934 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms