RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CTSZQ9UBR2 303 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 PCDHB10Q9UN67 800 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 MTORP42345 2549 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 MALRD1Q5VYJ5 2156 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 A0A0A6YYH2 397 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 A0A1B0GW55 424 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 TMEM82A0PJX8 343 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 A6NJ64 397 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 SIRPB1O00241 398 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 SOCS1O15524 211 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 PSPNO60542 156 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 PDCD6O75340 191 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 IGHV2-5P01817 119 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 GLAP06280 429 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4L2P0CJ85 424 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4L3P0CJ86 424 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4L4P0CJ87 422 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4L5P0CJ88 424 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4L6P0CJ89 424 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4L7P0CJ90 424 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 FUT3P21217 361 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 CHATP28329 748 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 BLVRBP30043 206 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 LMO4P61968 165 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4L9Q6RFH8 374 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 METAP1DQ6UB28 335 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 C17orf107Q6ZR85 190 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 NLRC3Q7RTR2 1065 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 ZNRF1Q8ND25 227 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 SNX22Q96L94 193 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 NUDT16L1Q9BRJ7 211 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 MIXL1Q9H2W2 232 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 DUX4Q9UBX2 424 aa16.49■□□□□ 0.23
PDLIM2-221ENST00000622702 K7N7A8 449 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 EIF4EP06730 217 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 SELLP14151 372 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 TMEM50BP56557 158 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 MOGAT2Q3SYC2 334 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 ATAD3CQ5T2N8 411 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 ASCC1Q8N9N2 400 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 SUMF2Q8NBJ7 301 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 OR8B3Q8NGG8 313 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 OR10R2Q8NGX6 335 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 PPP1R35Q8TAP8 253 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 RAB39BQ96DA2 213 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 S100A16Q96FQ6 103 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 NEDD4LQ96PU5 975 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 OR8B2Q96RD0 313 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 SHARPINQ9H0F6 387 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 HSF4Q9ULV5 492 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 YLPM1P49750 1951 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 RGS5O15539 181 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 TK1P04183 234 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 ELK1P19419 428 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 OR3A1P47881 315 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 TMEM249Q2WGJ8 235 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 PAN3Q58A45 887 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 ZNF841Q6ZN19 808 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 Q71RC1 249 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 DPCDQ9BVM2 203 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 PTTG2Q9NZH5 202 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 ADAM30Q9UKF2 790 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 PEX16Q9Y5Y5 336 aa16.48■□□□□ 0.23
PDLIM2-221ENST00000622702 DVL1O14640 695 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 NDUFB3O43676 98 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 FCN3O75636 299 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 CSN2P05814 226 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 KCNJ3P48549 501 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 LRRC10Q5BKY1 277 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 PLAC9Q5JTB6 97 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 LAX1Q8IWV1 398 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 OR8H2Q8N162 312 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 TMEM185AQ8NFB2 350 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 OR4S1Q8NGB4 309 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 OR5D13Q8NGL4 314 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 PHF21AQ96BD5 680 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 RAB3CQ96E17 227 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 DIABLOQ9NR28 239 aa16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 SLC25A10Q9UBX3 287 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-221ENST00000622702 TLN2Q9Y4G6 2542 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 DOCK11Q5JSL3 2073 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 MGST3O14880 152 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 XRCC3O43542 346 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 CLPXO76031 633 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 HEXAP06865 529 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 CDK2P24941 298 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 NPY4RP50391 375 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 PAX5Q02548 391 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 KRTAP1-1Q07627 177 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 RBM39Q14498 530 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 NKAPLQ5M9Q1 402 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 CSPG4Q6UVK1 2322 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 Q6ZTK2 550 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 C6orf201Q7Z4U5 140 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 ARHGAP5-AS1Q96IT6 56 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 WDFY2Q96P53 400 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 PPA2Q9H2U2 334 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 PLEKHJ1Q9NW61 149 aa16.46■□□□□ 0.23
PDLIM2-221ENST00000622702 MCRIP1C9JLW8 97 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms