RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 NXPH3O95157 252 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 OR2H2O95918 312 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 CFDP00746 253 aaPredicted RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 CXCL2P19875 107 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 AADACP22760 399 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SERPINF1P36955 418 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PIGPP57054 158 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SUPT4H1P63272 117 aaKnown RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 ABCA11PQ4W5N1 156 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 VAX1Q5SQQ9 334 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ZNF324BQ6AW86 544 aaPredicted RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 ADAM5Q6NVV9 412 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 MEX3BQ6ZN04 569 aaKnown RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 DPPA2Q7Z7J5 298 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 TGIF2LYQ8IUE0 185 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ARRDC1Q8N5I2 433 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 GALNT11Q8NCW6 608 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 OR8G5Q8NG78 346 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RFESDQ8TAC1 157 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RBMXL1Q96E39 390 aaKnown RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 MED30Q96HR3 178 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PHB2Q99623 299 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ARL6Q9H0F7 186 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ZNF286AQ9HBT8 521 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PCDHB16Q9NRJ7 776 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 C1orf123Q9NWV4 160 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 METRNQ9UJH8 293 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 FBXO9Q9UK97 447 aaPredicted RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 C14orf166Q9Y224 244 aaKnown RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 OSGIN2Q9Y236 505 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ZSCAN5BA6NJL1 495 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 RFPL4AA6NLU0 287 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 FAM90A27PA6NNH2 459 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 POM121CA8CG34 1229 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 RFPL4AL1F8VTS6 287 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 J3QT63 122 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ABCD4O14678 606 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 HSD17B6O14756 317 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TPD52L2O43399 206 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 SLC34A2O95436 690 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 MPC2O95563 127 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SCGB1D2O95969 90 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ZNF728P0DKX0 622 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 RPA2P15927 270 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 NAT1P18440 290 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 GRNP28799 593 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 CCKARP32238 428 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TIMP3P35625 211 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 HTR2BP41595 481 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 GABRA2P47869 451 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 MECP2P51608 486 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 AESQ08117 197 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 EDDM3AQ14507 147 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TMEM128Q5BJH2 165 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 C6orf183Q5T699 404 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ZBTB37Q5TC79 503 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CCDC36Q8IYA8 594 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 OR8H3Q8N146 312 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SPICQ8N5J4 248 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ZDHHC22Q8N966 263 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 RELL2Q8NC24 303 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 PLPPR1Q8TBJ4 325 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 PPP1R1CQ8WVI7 109 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 MRPS24Q96EL2 167 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 KIRREL1Q96J84 757 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TECTBQ96PL2 329 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CITED4Q96RK1 184 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 USB1Q9BQ65 265 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 NUDT16L1Q9BRJ7 211 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 DCTN5Q9BTE1 182 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 NECAP2Q9NVZ3 263 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 SLC2A8Q9NY64 477 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TRAPPC2LQ9UL33 140 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 HSF4Q9ULV5 492 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 RBM7Q9Y580 266 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 PLSCR5A0PG75 271 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 IQCF6A8MYZ5 107 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 H3BUI4 141 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 HSPA12AO43301 675 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 PSPNO60542 156 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CNOT4O95628 575 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 PTBP3O95758 552 aaKnown RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 GIPP09681 153 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 FPR2P25090 351 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CEACAM8P31997 349 aaPredicted RBP2.91□□□□□ -1.94
LIG4-205ENST00000614526 S100A10P60903 97 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 RAP2BP61225 183 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 HERV-K104P61576 105 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CCL8P80075 99 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ITPR1Q14643 2758 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 HERPUD1Q15011 391 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ARL6IP1Q15041 203 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 ACTBL2Q562R1 376 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 TIMM23BQ5SRD1 257 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 CLEC9AQ6UXN8 241 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 MOGAT3Q86VF5 341 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 LHFPL1Q86WI0 220 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 LINC01560Q8TB33 94 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 LRRC29Q8WV35 223 aa2.91□□□□□ -1.94
LIG4-205ENST00000614526 MITD1Q8WV92 249 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms