RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ADH4P08319 380 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 GATA4P43694 442 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 TNFAIP6P98066 277 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 RBM39Q14498 530 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 ZMYND11Q15326 602 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 MICBQ29980 383 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 ESCO2Q56NI9 601 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 VAX1Q5SQQ9 334 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 SUMF2Q8NBJ7 301 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 CITED4Q96RK1 184 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 PRRT1Q99946 306 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 SLC25A21Q9BQT8 299 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 C12orf4Q9NQ89 552 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 PCNX1Q96RV3 2341 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 B8ZZF3 427 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 FCGR3AP08637 254 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 GLRA1P23415 457 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 APOBEC3AP31941 199 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 ACP7Q6ZNF0 438 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 OR5H2Q8NGV7 314 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 ITLN1Q8WWA0 313 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 GINS4Q9BRT9 223 aa14.91□□□□□ -0.02
SHKBP1-224ENST00000600718 TRAV24A0A0B4J272 114 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 C3orf80F5H4A9 247 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 HS3ST1O14792 307 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 ZNF44P15621 663 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 GMFBP60983 142 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 IDO2Q6ZQW0 420 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 OR5AP2Q8NGF4 316 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 LRRC29Q8WV35 223 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 DYRK2Q92630 601 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 ERGIC1Q969X5 290 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 RIMS4Q9H426 269 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 FLVCR2Q9UPI3 526 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 ACACBO00763 2458 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 ESPL1Q14674 2120 aa14.9□□□□□ -0.02
SHKBP1-224ENST00000600718 C17orf100A8MU93 164 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 WNT9BO14905 357 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 ARPC1BO15143 372 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 PEX14O75381 377 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 KNG1P01042 644 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 CSN2P05814 226 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 RRAS2P62070 204 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 CHRFAM7AQ494W8 412 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 ARRDC1Q8N5I2 433 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 NEK7Q8TDX7 302 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 MAFIPQ8WZ33 124 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 DPCDQ9BVM2 203 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 TPRP12270 2363 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 SIAH2O43255 324 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 OR2H2O95918 312 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 CD55P08174 381 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 MECP2P51608 486 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 EFNB3Q15768 340 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 SRSF7Q16629 238 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 SMIM21Q3B7S5 101 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 SCGB2B2Q4G0G5 96 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 LAMTOR1Q6IAA8 161 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 MOGAT3Q86VF5 341 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 FAM90A1Q86YD7 464 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 RDH5Q92781 318 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 NEUROG1Q92886 237 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 HYLS1Q96M11 299 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 WDR13Q9H1Z4 485 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 CHMP1AQ9HD42 196 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 ANXA10Q9UJ72 324 aa14.89□□□□□ -0.03
SHKBP1-224ENST00000600718 NBEAQ8NFP9 2946 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 FAM221AA4D161 298 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 DEFB108AA8MXU0 73 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 SRRM5B3KS81 715 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 M0R233 179 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 PRAF2O60831 178 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 HAND1O96004 215 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 GRK1Q15835 563 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 SPRNQ5BIV9 151 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 TMEM17Q86X19 198 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 TMEM204Q9BSN7 226 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 CISD1Q9NZ45 108 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 TREM2Q9NZC2 230 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 COL6A6A6NMZ7 2263 aa14.88□□□□□ -0.03
SHKBP1-224ENST00000600718 C7orf66A4D0T2 115 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 B9A039 149 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 SLC33A1O00400 549 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 NAPSAO96009 420 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 PLAUP00749 431 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 LMO1P25800 156 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 LOXP28300 417 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 MDH2P40926 338 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 PAN3Q58A45 887 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 SHEQ5VZ18 495 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 PIK3IP1Q96FE7 263 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 BBC3Q96PG8 261 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 PPA2Q9H2U2 334 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 SEBOXQ9HB31 216 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 ZNF286AQ9HBT8 521 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 CADP27708 2225 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 IGKV1D-8A0A087WSZ0 117 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 POM121CA8CG34 1229 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 LEUTXA8MZ59 168 aa14.87□□□□□ -0.03
SHKBP1-224ENST00000600718 PYCARD-AS1I3L0S3 204 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms