RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 LHFPL3Q86UP9 236 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 OR4X2Q8NGF9 303 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 OR13C3Q8NGS6 347 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 EMG1Q92979 244 aaKnown RBP13.81□□□□□ -0.2
RETREG3-210ENST00000590541 OPALINQ96PE5 141 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 COMMD4Q9H0A8 199 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 ERVK13-1Q9NX77 482 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 DSCAML1Q8TD84 2053 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 IGKV1-9A0A0C4DH69 117 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 PEX2P28328 305 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 GBX2P52951 348 aaPredicted RBP13.8□□□□□ -0.2
RETREG3-210ENST00000590541 SLC34A1Q06495 639 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 PDZK1IP1Q13113 114 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 KHDC1LQ5JSQ8 128 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 SAXO1Q8IYX7 474 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 FAM58AQ8N1B3 248 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 OR5D14Q8NGL3 314 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 JAM3Q9BX67 310 aa13.8□□□□□ -0.2
RETREG3-210ENST00000590541 SMPD3Q9NY59 655 aaPredicted RBP13.8□□□□□ -0.2
RETREG3-210ENST00000590541 hADV38S2A0JD32 116 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 IRGMA1A4Y4 181 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 MEX3AA1L020 520 aaKnown RBP13.79□□□□□ -0.2
RETREG3-210ENST00000590541 F8VVB4 439 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 F8VWA3 439 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 BAG2O95816 211 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 HAND1O96004 215 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 LPLP06858 475 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 ZNF728P0DKX0 622 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 LMO1P25800 156 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 POU3F4P49335 361 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 EDDM3BP56851 147 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 DYNC1I2Q13409 638 aaKnown RBP13.79□□□□□ -0.2
RETREG3-210ENST00000590541 CASC10Q5T4H9 136 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 SERPINA12Q8IW75 414 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 BATF2Q8N1L9 274 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 OR5AK2Q8NH90 309 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 CPNE2Q96FN4 548 aaPredicted RBP13.79□□□□□ -0.2
RETREG3-210ENST00000590541 ZCCHC4Q9H5U6 513 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 AASSQ9UDR5 926 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 MYRFQ9Y2G1 1151 aa13.79□□□□□ -0.2
RETREG3-210ENST00000590541 LSM4Q9Y4Z0 139 aaKnown RBP13.79□□□□□ -0.2
RETREG3-210ENST00000590541 H0YHG0 523 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 SH2D1BO14796 132 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 IGHV1-8P0DP01 117 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 ERP29P30040 261 aaKnown RBP13.78□□□□□ -0.2
RETREG3-210ENST00000590541 THBS3P49746 956 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 CCDC58Q4VC31 144 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 ABCA11PQ4W5N1 156 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 MINOS1Q5TGZ0 78 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 PARP16Q8N5Y8 322 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 ZNF649Q9BS31 505 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 MCRIP2Q9BUT9 160 aaKnown RBP13.78□□□□□ -0.2
RETREG3-210ENST00000590541 HMG20AQ9NP66 347 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 AMBNQ9NP70 447 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 FGF20Q9NP95 211 aaPredicted RBP13.78□□□□□ -0.2
RETREG3-210ENST00000590541 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.78□□□□□ -0.2
RETREG3-210ENST00000590541 LINC00312Q9Y6C7 94 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 MINOS1-NBL1R4GNA1 71 aa13.78□□□□□ -0.2
RETREG3-210ENST00000590541 FUOMA2VDF0 154 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 MGST3O14880 152 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 ZFPL1O95159 310 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 PRKACAP17612 351 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 BCL3P20749 454 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 DCKP27707 260 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 NPBWR2P48146 333 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 DGCR2P98153 550 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 GRK1Q15835 563 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 TTC23Q5W5X9 447 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 C16orf82Q7Z2V1 217 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 PACRGLQ8N7B6 248 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 OR51A4Q8NGJ6 313 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 ZNF714Q96N38 554 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 ISG20L2Q9H9L3 353 aaKnown RBP13.77□□□□□ -0.21
RETREG3-210ENST00000590541 LIN7BQ9HAP6 207 aa13.77□□□□□ -0.21
RETREG3-210ENST00000590541 RBFOX1Q9NWB1 397 aaKnown RBP13.77□□□□□ -0.21
RETREG3-210ENST00000590541 HUWE1Q7Z6Z7 4374 aaKnown RBP13.77□□□□□ -0.21
RETREG3-210ENST00000590541 SH2D7A6NKC9 451 aaPredicted RBP13.76□□□□□ -0.21
RETREG3-210ENST00000590541 SULT1B1O43704 296 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 KDM4BO94953 1096 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 INMTO95050 263 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 AMY1AP04745 511 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 AMY2AP04746 511 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 GABRR1P24046 479 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 CD24P25063 80 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 UNQ9370/PRO34162Q6UXP9 181 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 TCF23Q7RTU1 214 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 CHST4Q8NCG5 386 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 SETD9Q8NE22 299 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 OR51D1Q8NGF3 324 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 OR13C9Q8NGT0 318 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 OR10AC1Q8NH08 325 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 NDNFQ8TB73 568 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 APH1BQ8WW43 257 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 TFAP2CQ92754 450 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 EXOSC4Q9NPD3 245 aaKnown RBP13.76□□□□□ -0.21
RETREG3-210ENST00000590541 GAR1Q9NY12 217 aaKnown RBP13.76□□□□□ -0.21
RETREG3-210ENST00000590541 DHDHQ9UQ10 334 aa13.76□□□□□ -0.21
RETREG3-210ENST00000590541 STAB2Q8WWQ8 2551 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms