RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 TOMM40LQ969M1 308 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 LRGUKQ96M69 825 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 ADI1Q9BV57 179 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 DCLRE1BQ9H816 532 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 ADGRL4Q9HBW9 690 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 HMG20AQ9NP66 347 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 EXOSC4Q9NPD3 245 aaKnown RBP9.68□□□□□ -0.86
SNX6-209ENST00000557265 PCDHB16Q9NRJ7 776 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 CLN6Q9NWW5 311 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 GAR1Q9NY12 217 aaKnown RBP9.68□□□□□ -0.86
SNX6-209ENST00000557265 SCOCQ9UIL1 159 aa9.68□□□□□ -0.86
SNX6-209ENST00000557265 LINC01548A6NM66 108 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 SEC14L6B5MCN3 397 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 FGF16O43320 207 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 IGHV3-7P01780 117 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 IGHG2P01859 326 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 RPLP1P05386 114 aaKnown RBP9.67□□□□□ -0.86
SNX6-209ENST00000557265 KRT8P05787 483 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 CRISP1P54107 249 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 SCN1BQ07699 218 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 C17orf58Q2M2W7 97 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 TEX38Q6PEX7 206 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 SSX6Q7RTT6 188 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 FOXRED2Q8IWF2 684 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 STPG2Q8N412 459 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 DNAAF1Q8NEP3 725 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 Q8NFD4 153 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 OR8U1Q8NH10 309 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 HRASLS5Q96KN8 279 aa9.67□□□□□ -0.86
SNX6-209ENST00000557265 H2AFY2Q9P0M6 372 aaPredicted RBP9.67□□□□□ -0.86
SNX6-209ENST00000557265 IGKV1-9A0A0C4DH69 117 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 ZNF729A6NN14 1252 aaPredicted RBP9.66□□□□□ -0.86
SNX6-209ENST00000557265 M0R129 80 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 ZNF44P15621 663 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 CHATP28329 748 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 PDZK1IP1Q13113 114 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 DIAPH2-AS1Q14236 149 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 KIR2DS1Q14954 304 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 PTGES3Q15185 160 aaKnown RBP9.66□□□□□ -0.86
SNX6-209ENST00000557265 PNLIPRP3Q17RR3 467 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 KRBOX4Q5JUW0 171 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 AADACL4Q5VUY2 407 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 RDH10Q8IZV5 341 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 CCDC54Q8NEL0 328 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 CANT1Q8WVQ1 401 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 PP6455Q8WZ26 134 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 LEAP2Q969E1 77 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 CCDC124Q96CT7 223 aaKnown RBP9.66□□□□□ -0.86
SNX6-209ENST00000557265 C10orf35Q96D05 121 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 ASB9Q96DX5 294 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 COQ2Q96H96 371 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 KIRREL1Q96J84 757 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 TBX5Q99593 518 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 MED4Q9NPJ6 270 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 AMMECR1Q9Y4X0 333 aaPredicted RBP9.66□□□□□ -0.86
SNX6-209ENST00000557265 SACSQ9NZJ4 4579 aa9.66□□□□□ -0.86
SNX6-209ENST00000557265 HUWE1Q7Z6Z7 4374 aaKnown RBP9.66□□□□□ -0.86
SNX6-209ENST00000557265 DSCAML1Q8TD84 2053 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 IGKV1-12A0A0C4DH73 117 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 KBTBD11-OT1A0A1B0GTJ5 212 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 A0A1W2PPI3 338 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 A0A1W2PQL4 384 aaPredicted RBP9.65□□□□□ -0.86
SNX6-209ENST00000557265 METTL15A6NJ78 407 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 J3QR06 171 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 IGKV1D-33P01593 117 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 IGKV1-33P01594 117 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 IGKV1D-12P01611 117 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 LYL1P12980 280 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 PRKACBP22694 351 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 MADCAM1Q13477 382 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 ATXN7L3Q14CW9 347 aaPredicted RBP9.65□□□□□ -0.86
SNX6-209ENST00000557265 ZNF260Q3ZCT1 412 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 CXorf66Q5JRM2 361 aaPredicted RBP9.65□□□□□ -0.86
SNX6-209ENST00000557265 SBSPONQ8IVN8 264 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 PRSS35Q8N3Z0 413 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 TCEANCQ8N8B7 351 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 RFT1Q96AA3 541 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 ADAT3Q96EY9 351 aaPredicted RBP9.65□□□□□ -0.86
SNX6-209ENST00000557265 RCHY1Q96PM5 261 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 COMMD4Q9H0A8 199 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 OR6C3Q9NZP0 311 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 ZNF256Q9Y2P7 627 aaPredicted RBP9.65□□□□□ -0.86
SNX6-209ENST00000557265 ARL2BPQ9Y2Y0 163 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 SMAD5-AS1Q9Y6J3 95 aa9.65□□□□□ -0.86
SNX6-209ENST00000557265 LCE6AA0A183 80 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 LOC107986453A0A1B0GWG9 222 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 AP4M1O00189 453 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 SLC33A1O00400 549 aaPredicted RBP9.64□□□□□ -0.87
SNX6-209ENST00000557265 DEGS1O15121 323 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 DCTN3O75935 186 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 KDM4BO94953 1096 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 LY86O95711 162 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 CSN2P05814 226 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 CGB3P0DN86 165 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 CGB7P0DN87 165 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 ATF1P18846 271 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 GPR12P47775 334 aa9.64□□□□□ -0.87
SNX6-209ENST00000557265 CDX1P47902 265 aaPredicted RBP9.64□□□□□ -0.87
SNX6-209ENST00000557265 RAB7AP51149 207 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms