RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 Q6P435 159 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 BRICD5Q6PL45 260 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 GLIPR1L1Q6UWM5 242 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 Q6YL49 198 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 C1orf122Q6ZSJ8 110 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 C9orf139Q6ZV77 190 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 OSR2Q8N2R0 312 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 MS4A15Q8N5U1 240 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 PXT1Q8NFP0 134 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 NEK7Q8TDX7 302 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 C1orf147Q96MC9 270 aaPredicted RBP9.04□□□□□ -0.96
DDB1-222ENST00000543627 ZNF714Q96N38 554 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 DUSP21Q9H596 190 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 FOXJ3Q9UPW0 622 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 ST3GAL6Q9Y274 331 aa9.04□□□□□ -0.96
DDB1-222ENST00000543627 MRPS28Q9Y2Q9 187 aaKnown RBP9.04□□□□□ -0.96
DDB1-222ENST00000543627 TRGV10A0A0A0MS01 117 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 TRBV5-7A0A0A0MS05 114 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 A0A1W2PP11 408 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 FUOMA2VDF0 154 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 FAM172BPA6NC97 362 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 BTBD17A6NE02 478 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 SLC33A1O00400 549 aaPredicted RBP9.03□□□□□ -0.96
DDB1-222ENST00000543627 PIN1P1O15428 100 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 IGHV4-59P01825 116 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 FBP1P09467 338 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 P2RX3P56373 397 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 RPS25P62851 125 aaKnown RBP9.03□□□□□ -0.96
DDB1-222ENST00000543627 BDH1Q02338 343 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 IRF3Q14653 427 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 LTC4SQ16873 150 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 HSD17B12Q53GQ0 312 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 RNLSQ5VYX0 342 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 C16orf87Q6PH81 154 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 PRSS48Q7RTY5 328 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 C3orf56Q8N813 242 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 ZFAND2BQ8WV99 257 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 C17orf50Q8WW18 174 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 TNFRSF14Q92956 283 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 DMRTB1Q96MA1 342 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 SLITRK2Q9H156 845 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 BANF2Q9H503 90 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 RHOFQ9HBH0 211 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 PCDHB16Q9NRJ7 776 aa9.03□□□□□ -0.96
DDB1-222ENST00000543627 LSM2Q9Y333 95 aaKnown RBP9.03□□□□□ -0.96
DDB1-222ENST00000543627 MEIKINA0A087WXM9 373 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 TRAV39A0A0B4J263 110 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 FAM181BA6NEQ2 426 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 GEMIN2O14893 280 aaKnown RBP9.02□□□□□ -0.97
DDB1-222ENST00000543627 CRTAPO75718 401 aaPredicted RBP9.02□□□□□ -0.97
DDB1-222ENST00000543627 CD1AP06126 327 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 GTF2F2P13984 249 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 NFYBP25208 207 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 MEF2CQ06413 473 aaPredicted RBP9.02□□□□□ -0.97
DDB1-222ENST00000543627 ACSM1Q08AH1 577 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 LY6EQ16553 131 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 TAF9Q16594 264 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 PRAMEF5Q5TYX0 476 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 CHST4Q8NCG5 386 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 OR13D1Q8NGV5 346 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 FAM46BQ96A09 425 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 MGLLQ99685 303 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 BARHL1Q9BZE3 327 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 CHIAQ9BZP6 476 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 SELENOIQ9C0D9 397 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 PPIL3Q9H2H8 161 aaKnown RBP9.02□□□□□ -0.97
DDB1-222ENST00000543627 DPAGT1Q9H3H5 408 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 ZNF581Q9P0T4 197 aa9.02□□□□□ -0.97
DDB1-222ENST00000543627 TRAV24A0A0B4J272 114 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 ODAMA1E959 279 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 C17orf98A8MV24 154 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 ZNF780AO75290 641 aaPredicted RBP9.01□□□□□ -0.97
DDB1-222ENST00000543627 GPX5O75715 221 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 IGHV3-7P01780 117 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 RNASE1P07998 156 aaKnown RBP9.01□□□□□ -0.97
DDB1-222ENST00000543627 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 SRMP19623 302 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 FSTP19883 344 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 LMO1P25800 156 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 GLP1RP43220 463 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 GPR50Q13585 617 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 GPR176Q14439 515 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 IL13RA2Q14627 380 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 FAM189A2Q15884 450 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 GLT8D1Q68CQ7 371 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 ELP2Q6IA86 826 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 HCP5Q6MZN7 132 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 BAIAP2L2Q6UXY1 529 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 LHFPL4Q7Z7J7 247 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 C11orf42Q8N5U0 333 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 SUMF2Q8NBJ7 301 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 OR4D6Q8NGJ1 314 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 NDNFQ8TB73 568 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 CCDC107Q8WV48 283 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 SSMEM1Q8WWF3 244 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 THRSPQ92748 146 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 GAL3ST2Q9H3Q3 398 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 ZMAT3Q9HA38 289 aaKnown RBP9.01□□□□□ -0.97
DDB1-222ENST00000543627 KIF25Q9UIL4 384 aa9.01□□□□□ -0.97
DDB1-222ENST00000543627 LINC00312Q9Y6C7 94 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms