RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 HAND1O96004 215 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 CYB5AP00167 134 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 GTF2F2P13984 249 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 USF1P22415 310 aaPredicted RBP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 SNU13P55769 128 aaKnown RBP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 TMEM50BP56557 158 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 PAX2Q02962 417 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 KRTAP1-1Q07627 177 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 IL13RA2Q14627 380 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 TAF9Q16594 264 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 SPIN3Q5JUX0 258 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 IDNKQ5T6J7 187 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 SPNS3Q6ZMD2 512 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 OR2W3Q7Z3T1 314 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 ZNRF1Q8ND25 227 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 LGALS14Q8TCE9 139 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 MRPS24Q96EL2 167 aaKnown RBP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 TIMD4Q96H15 378 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 DNTTIP1Q9H147 329 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 ZNF665Q9H7R5 613 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 ELL3Q9HB65 397 aaPredicted RBP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 DNAJB11Q9UBS4 358 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 ST3GAL6Q9Y274 331 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 SONP18583 2426 aaKnown RBP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 CUBNO60494 3623 aa8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
NPIPB3-210ENST00000542817 A0A075B6Q4 140 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM25AB3EWG3 89 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM25CB3EWG5 89 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM25GB3EWG6 89 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 K7N7A8 449 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 ADAM20O43506 726 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 NDUFA2O43678 99 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 CRTAPO75718 401 aaPredicted RBP8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 MPIG6BO95866 241 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 OR3A1P47881 315 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 CAPZA1P52907 286 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 GNG2P59768 71 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 COL10A1Q03692 680 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 MOGAT2Q3SYC2 334 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 BRICD5Q6PL45 260 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 Q6ZPA2 131 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 PEG10Q86TG7 708 aaKnown RBP8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 MUC20Q8N307 709 aaPredicted RBP8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 SPICQ8N5J4 248 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 ASCC1Q8N9N2 400 aaKnown RBP8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 POC5Q8NA72 575 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 OR4S1Q8NGB4 309 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 OR6F1Q8NGZ6 308 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 KCNG3Q8TAE7 436 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 CAPSLQ8WWF8 208 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 PTX4Q96A99 478 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 MRI1Q9BV20 369 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 SELENOIQ9C0D9 397 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 OR14J1Q9UGF5 321 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 ZNF221Q9UK13 617 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 KCNK7Q9Y2U2 307 aa8.85□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A10PA6NDY2 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A18PA6NE21 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A16PA6NEW6 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 HMX3A6NHT5 357 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A20PA6NIJ5 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A8PA6NJQ4 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A7PA6NKC0 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A22PA8MWA6 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A12PA8MX19 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A5PA8MXJ8 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 A8MXK9 166 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A23PA8MXZ1 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 C22orf46C9J442 243 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 H7C1Q1 480 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 RAB27BO00194 218 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 SIRPB1O00241 398 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 DVL1O14640 695 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 TMPRSS2O15393 492 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 SOCS1O15524 211 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 PHF1O43189 567 aaPredicted RBP8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 TMEM127O75204 238 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 CCNKO75909 580 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A15PP0C7V4 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A13PP0C7W8 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A14PP0C7W9 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 FAM90A24PP0C7X0 464 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 RAB6AP20340 208 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 CHATP28329 748 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 S100A5P33763 92 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 GABRA2P47869 451 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 RORCP51449 518 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 SCAND1P57086 179 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 GPR176Q14439 515 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 CDK10Q15131 360 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 PLAC9Q5JTB6 97 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 WDR25Q64LD2 544 aaPredicted RBP8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 STEAP3Q658P3 488 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 TCF23Q7RTU1 214 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 KCTD12Q96CX2 325 aaKnown RBP8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 COQ2Q96H96 371 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 GAL3ST1Q99999 423 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
NPIPB3-210ENST00000542817 TMEM59Q9BXS4 323 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms