RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
CDH20-202ENST00000536675 PAX1P15863 534 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 FUT3P21217 361 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
CDH20-202ENST00000536675 GUCA1AP43080 201 aaPredicted RBP12.53□□□□□ -0.4
CDH20-202ENST00000536675 VAMP2P63027 116 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 PDCD1Q15116 288 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 ZNF124Q15973 351 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 CMTM1Q8IZ96 169 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 TRBV11-1A0A0K0K1C0 115 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
CDH20-202ENST00000536675 MSX1P28360 303 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 CFHR1Q03591 330 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 TLE4Q04727 773 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 DEFB119Q8N690 84 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 OR10G3Q8NGC4 313 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 NABP1Q96AH0 204 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 RCC1LQ96I51 464 aaKnown RBP12.53□□□□□ -0.4
CDH20-202ENST00000536675 SNX22Q96L94 193 aa12.53□□□□□ -0.4
CDH20-202ENST00000536675 IGKV1-12A0A0C4DH73 117 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 SMCO3A2RU48 225 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 CCDC85CA6NKD9 419 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 ADAM20O43506 726 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 PPYP01298 95 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 IGKV1D-12P01611 117 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 RND2P52198 227 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 FAM90A2PQ658T7 463 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 ANKRD37Q7Z713 158 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 ZNF695Q8IW36 515 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 TMEM123Q8N131 208 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 OR5R1Q8NH85 324 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.4
CDH20-202ENST00000536675 SPSB1Q96BD6 273 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 MISP3Q96FF7 219 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 METTL7AQ9H8H3 244 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 CD207Q9UJ71 328 aa12.52□□□□□ -0.4
CDH20-202ENST00000536675 NXPH3O95157 252 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 HBE1P02100 147 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 CEACAM1P13688 526 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 RAB11AP62491 216 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 ZNF154Q13106 437 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
CDH20-202ENST00000536675 RLN3Q8WXF3 142 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 CRLF2Q9HC73 371 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 GNG13Q9P2W3 67 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
CDH20-202ENST00000536675 OR2J2O76002 312 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 GNRHRP30968 328 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 HIST1H3AP68431 136 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 SRPXP78539 464 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 FAM69BQ5VUD6 431 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 TBC1D26Q86UD7 250 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 STX12Q86Y82 276 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 OR2M3Q8NG83 312 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 OR10G4Q8NGN3 311 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 TMEM56Q96MV1 263 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 GPHA2Q96T91 129 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 PLEK2Q9NYT0 353 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 TMEM56-RWDD3S4R434 201 aa12.52□□□□□ -0.41
CDH20-202ENST00000536675 A0A1B0GU03 582 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 C9J4A7 227 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 CLDN34H7C241 214 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 IGLV3-19P01714 112 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 MDKP21741 143 aaPredicted RBP12.51□□□□□ -0.41
CDH20-202ENST00000536675 ZFP36L1Q07352 338 aaKnown RBP12.51□□□□□ -0.41
CDH20-202ENST00000536675 ZNF385CQ66K41 422 aaPredicted RBP12.51□□□□□ -0.41
CDH20-202ENST00000536675 OSR2Q8N2R0 312 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 IL22RA1Q8N6P7 574 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 OR5L2Q8NGL0 311 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 SSX3Q99909 188 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 C2orf88Q9BSF0 95 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 IGLV3-32A0A0A0MS00 114 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 MKRN2OSH3BPM6 223 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 JMJD7P0C870 316 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 SSX2Q16385 188 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 C10orf128Q5T292 105 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 ASCL4Q6XD76 172 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 SIGLEC12Q96PQ1 595 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 SPIN2AQ99865 258 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 SPIN2BQ9BPZ2 258 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
CDH20-202ENST00000536675 HIPK2Q9H2X6 1198 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 TMEM242Q9NWH2 141 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 ST3GAL6Q9Y274 331 aa12.51□□□□□ -0.41
CDH20-202ENST00000536675 ASCC3Q8N3C0 2202 aaKnown RBP12.51□□□□□ -0.41
CDH20-202ENST00000536675 LOC102725191A0A1B0GVB3 256 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 SHBQ15464 509 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 EXT1Q16394 746 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 DPPA3Q6W0C5 159 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 C5orf24Q7Z6I8 188 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 PLPPR1Q8TBJ4 325 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 TMEM54Q969K7 222 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 SPTSSAQ969W0 71 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 CDCA3Q99618 268 aaPredicted RBP12.5□□□□□ -0.41
CDH20-202ENST00000536675 PITPNC1Q9UKF7 332 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 CHD3Q12873 2000 aaKnown RBP12.5□□□□□ -0.41
CDH20-202ENST00000536675 A0A087WZY1 265 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 EPOPA6NHQ4 379 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 CHST1O43916 411 aa12.5□□□□□ -0.41
CDH20-202ENST00000536675 CYB5R3P00387 301 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms