RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SLC25A22Q9H936 323 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 COL11A1P12107 1806 aaPredicted RBP14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 LOC102723971A0A1B0GUV8 181 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 PTP4A3O75365 173 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 TMEM91Q6ZNR0 172 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 SLC26A10Q8NG04 563 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 RAB1CQ92928 201 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 TMEM38BQ9NVV0 291 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 LPAR3Q9UBY5 353 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 MMP24Q9Y5R2 645 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 HAND1O96004 215 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 HLA-GP17693 338 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 ACAA2P42765 397 aaKnown RBP14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 GGTLC2Q14390 218 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 ZNF721Q8TF20 911 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 TMEM37Q8WXS4 190 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 NAT8BQ9UHF3 227 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 RBBP6Q7Z6E9 1792 aaKnown RBP14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 TRAV8-7A0A075B6U6 113 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 J3QT63 122 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 BCL3P20749 454 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 PRSS12P56730 875 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 NARFLQ9H6Q4 476 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 DYNLT3P51808 116 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 TMEM52Q8NDY8 209 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 R3HDM4Q96D70 268 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 PPYP01298 95 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 PNLIPP16233 465 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 GZMHP20718 246 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 SEZ6L2Q6UXD5 910 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 SSX7Q7RTT5 188 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 CHST5Q9GZS9 411 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 CD1AP06126 327 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 CD3EP07766 207 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 SP1P08047 785 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 CD82P27701 267 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 HLA-DRB3P79483 266 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 TIPARPQ7Z3E1 657 aaKnown RBP14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 GPA33Q99795 319 aa14.53□□□□□ -0.08
PCDHA1-203ENST00000504120 RBFOX3A6NFN3 312 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 M0R296 226 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 SOX15O60248 233 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 CA11O75493 328 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 COX7A1P24310 79 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 PNRC1Q12796 327 aaPredicted RBP14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 DHRS7BQ6IAN0 325 aaPredicted RBP14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 SH2D7A6NKC9 451 aaPredicted RBP14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 GOSR1O95249 250 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 PMCHP20382 165 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 SPINK9Q5DT21 86 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 LINC00596Q86U02 117 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 OR5A2Q8NGI9 324 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 MANBALQ9NQG1 85 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 OPN4Q9UHM6 478 aa14.52□□□□□ -0.08
PCDHA1-203ENST00000504120 PLA2G10O15496 165 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 IGHV4-34P06331 123 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 VSIG8P0DPA2 414 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 FABP4P15090 132 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 PMELP40967 661 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 SIGLEC14Q08ET2 396 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 IQCJQ1A5X6 159 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 FAM210BQ96KR6 192 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 CDX2Q99626 313 aaPredicted RBP14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 VAMP8Q9BV40 100 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 ST6GALNAC2Q9UJ37 374 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 NGFRP08138 427 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 PTTG1IPP53801 180 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 PTX4Q96A99 478 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 LRRC3BQ96PB8 259 aa14.52□□□□□ -0.09
PCDHA1-203ENST00000504120 CDIPTO14735 213 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 GATCO43716 136 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 RPS4Y1P22090 263 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 MNX1P50219 401 aaPredicted RBP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 TFF2Q03403 129 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 TSPO2Q5TGU0 170 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 BTNL3Q6UXE8 466 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 GAPTQ8N292 157 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 FAM24BQ8N5W8 94 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 UCN2Q96RP3 112 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 TMEM167BQ9NRX6 74 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 DTX4Q9Y2E6 619 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 MMP7P09237 267 aaPredicted RBP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 CXCL3P19876 107 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 LSM11P83369 360 aaKnown RBP eCLIP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 ZP4Q12836 540 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 SIGIRRQ6IA17 410 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 APOBEC4Q8WW27 367 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 GRAMD2BQ96HH9 432 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 GYPAP02724 150 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 RPS4XP62701 263 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 RPEL1Q2QD12 228 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 OR1A1Q9P1Q5 309 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 PCDHGA9Q9Y5G4 932 aaKnown RBP14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 CHST1O43916 411 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 TOX4O94842 621 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 HIST1H3AP68431 136 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 ABHD3Q8WU67 409 aa14.51□□□□□ -0.09
PCDHA1-203ENST00000504120 K7ESF4 209 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 OR2M7Q8NG81 312 aa14.5□□□□□ -0.09
PCDHA1-203ENST00000504120 HSD17B10Q99714 261 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms