RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ITIH4Q14624 930 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 TRAM2Q15035 370 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 TMEM183BQ1AE95 376 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 TTLL9Q3SXZ7 439 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 C2orf83Q53S99 150 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 OR52W1Q6IF63 320 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 ANGPTL8Q6UXH0 198 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 H2AFVQ71UI9 128 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 ZNF429Q86V71 674 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 SBSPONQ8IVN8 264 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 TMEM183AQ8IXX5 376 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 OR51G1Q8NGK1 321 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 OR9G4Q8NGQ1 327 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 NUBPLQ8TB37 319 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 RNF185Q96GF1 192 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 ZNF285Q96NJ3 590 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 TSSK3Q96PN8 268 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 TMEM165Q9HC07 324 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 LYRM4Q9HD34 91 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 CHRAC1Q9NRG0 131 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 STOX2Q9P2F5 926 aaPredicted RBP3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 CLN8Q9UBY8 286 aa3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 BOKQ9UMX3 212 aaPredicted RBP3.23□□□□□ -1.89
SSX2IP-208ENST00000490476 SORL1Q92673 2214 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 TRAV39A0A0B4J263 110 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 MDFIC2A0A1B0GVS7 189 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 LYRM9A8MSI8 78 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 PANO1I0J062 215 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 M0QYV0 167 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 CDK14O94921 469 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 MPZL1O95297 269 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 HLA-DRAP01903 254 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 BGLAPP02818 100 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 GZMAP12544 262 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 CXCL5P42830 114 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 LHX2P50458 406 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 CCR6P51684 374 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 RND2P52198 227 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 UBE2MP61081 183 aaKnown RBP3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 MXD1Q05195 221 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 PON3Q15166 354 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 HADHQ16836 314 aaKnown RBP3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 BRMS1LQ5PSV4 323 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 ANKRD22Q5VYY1 191 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 PLCXD3Q63HM9 321 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 ZNF493Q6ZR52 646 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 RTL4Q6ZR62 310 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 C6orf120Q7Z4R8 191 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 CAMK2N1Q7Z7J9 78 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 RNF175Q8N4F7 328 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 LINC01555Q8NAE3 123 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 OR52E5Q8NH55 327 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 RNF138Q8WVD3 245 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 POP5Q969H6 163 aaKnown RBP3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 S100PBPQ96BU1 408 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 ASB9Q96DX5 294 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 DNAJC1Q96KC8 554 aaKnown RBP3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 MRPL37Q9BZE1 423 aaKnown RBP3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 XKR8Q9H6D3 395 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 ABCB10Q9NRK6 738 aa3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 MYEF2Q9P2K5 600 aaKnown RBP3.22□□□□□ -1.89
SSX2IP-208ENST00000490476 H0Y9J4 135 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 M0R3G1 203 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 ICOSLGO75144 302 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 CA11O75493 328 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 GNAO1P09471 354 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 UBCP0CG48 685 aaKnown RBP3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 SMIM10L1P0DMW3 83 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 CCL3P10147 92 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 GGT1P19440 569 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 TUBG1P23258 451 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 GTF2H1P32780 548 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 CRISP3P54108 245 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 AP1S1P61966 158 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 HMGCS1Q01581 520 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 TSC22D1Q15714 1073 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 RSPO1Q2MKA7 263 aaPredicted RBP3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 AGBL2Q5U5Z8 902 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 DEFB106AQ8N104 65 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 OR5K2Q8NHB8 316 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 SMIM10Q96HG1 83 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 MICU1Q9BPX6 476 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 MRPS30Q9NP92 439 aaKnown RBP3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 TUBG2Q9NRH3 451 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 CISHQ9NSE2 258 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 MTCH1Q9NZJ7 389 aa3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 YARS2Q9Y2Z4 477 aaKnown RBP3.21□□□□□ -1.9
SSX2IP-208ENST00000490476 UQCRHLA0A096LP55 91 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 SIGLEC16A6NMB1 481 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 H0YHG0 523 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 SMKR1H3BMG3 65 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 RDH16O75452 317 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 FCN3O75636 299 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 TRAPPC6AO75865 159 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 ARG1P05089 322 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 SERPINE2P07093 398 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 DNAH10OSP0CZ25 163 aa3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 GPX4P36969 197 aaPredicted RBP3.2□□□□□ -1.9
SSX2IP-208ENST00000490476 CEACAM6P40199 344 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms