RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SLC7A13Q8TCU3 470 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 NEK7Q8TDX7 302 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 SMIM4Q8WVI0 70 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 SPRYD4Q8WW59 207 aaPredicted RBP2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 RXFP2Q8WXD0 754 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 FAM3CQ92520 227 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 FGF11Q92914 225 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 BADQ92934 168 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 S100PBPQ96BU1 408 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 GALNT14Q96FL9 552 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 ZNF382Q96SR6 550 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 PAXXQ9BUH6 204 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 SNRNP25Q9BV90 132 aaKnown RBP2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 DDA1Q9BW61 102 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 DUSP16Q9BY84 665 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 MFFQ9GZY8 342 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 LRRN3Q9H3W5 708 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 SMDT1Q9H4I9 107 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 CLMPQ9H6B4 373 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 TMEM27Q9HBJ8 222 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 ADAP2Q9NPF8 381 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 LHX9Q9NQ69 397 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 UBQLN4Q9NRR5 601 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 CISHQ9NSE2 258 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 TREX1Q9NSU2 369 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 MARCH5Q9NX47 278 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 SLC25A37Q9NYZ2 338 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 ABRACLQ9P1F3 81 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 COMMD3Q9UBI1 195 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 CACFD1Q9UGQ2 172 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 OR52A1Q9UKL2 312 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 OR10H1Q9Y4A9 318 aa2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 PUS1Q9Y606 427 aaKnown RBP eCLIP2.84□□□□□ -1.95
ECHDC1-217ENST00000488087 LY75O60449 1722 aa2.84□□□□□ -1.96
ECHDC1-217ENST00000488087 STRCP1A6NGW2 1772 aa2.84□□□□□ -1.96
ECHDC1-217ENST00000488087 ITGB4P16144 1822 aa2.84□□□□□ -1.96
ECHDC1-217ENST00000488087 ADAMTS9Q9P2N4 1935 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 NRXN2Q9P2S2 1712 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 A0A1B0GW64 132 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 A0A1W2PNV4 684 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 KANTRA0A1W2PQU2 76 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 GGT3PA6NGU5 568 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 FRG2CA6NGY1 282 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR5H1A6NKK0 313 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 IQCF5A8MTL0 148 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 IDSB3KWA1 339 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 C9J4A7 227 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 GABARAPH6UMI1 98 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 HAS3O00219 553 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 TNFRSF11BO00300 401 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 RFXANKO14593 260 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 NBR2O15453 112 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ARPC5O15511 151 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 EEF1E1O43324 174 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 KDELR3O43731 214 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ACTL6AO96019 429 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CD74P04233 296 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ADRA2AP08913 450 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF35P13682 527 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 IGHV1-2P23083 117 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 PPIBP23284 216 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ZBTB25P24278 435 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 G0S2P27469 103 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 PSMB6P28072 239 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 GABRA4P48169 554 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 NOVA1P51513 510 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CEBPGP53567 150 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CRISP1P54107 249 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 KLF3P57682 345 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10A3P58181 314 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2B8PP59922 312 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 STXBP1P61764 594 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 RPL23AP62750 156 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 RPL32P62910 135 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CRADDP78560 199 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 VLDLRP98155 873 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 FABP5Q01469 135 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 BCL2L1Q07817 233 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 SKP2Q13309 424 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 PTGES3Q15185 160 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 SURF2Q15527 256 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM241Q24JQ0 296 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 GGTA1PQ4G0N0 100 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 PRR30Q53SZ7 412 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 COA6Q5JTJ3 125 aaKnown RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR10K2Q6IF99 312 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM220Q6QAJ8 160 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 HEPN1Q6WQI6 88 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ACOT7LQ6ZUV0 252 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC35D2Q76EJ3 337 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 BHLHA15Q7RTS1 189 aaPredicted RBP2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC36A1Q7Z2H8 476 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF683Q8IZ20 524 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST3H2BBQ8N257 126 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 LINC00471Q8N535 108 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CSNK1A1LQ8N752 337 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 CCDC54Q8NEL0 328 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2M7Q8NG81 312 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR2AP1Q8NGE2 309 aa2.83□□□□□ -1.96
ECHDC1-217ENST00000488087 OR9K2Q8NGE7 335 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms