RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ZNF665Q9H7R5 613 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 SERINC1Q9NRX5 453 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 SOHLH2Q9NX45 425 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 PCDH15Q96QU1 1955 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 WDFY3Q8IZQ1 3526 aa11.95□□□□□ -0.5
NPHP4-207ENST00000470763 LOC102723971A0A1B0GUV8 181 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 B4DEV8 164 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 F5H5K5 113 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 SPRY1O43609 319 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-207ENST00000470763 NUBP1P53384 320 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-207ENST00000470763 FOXF1Q12946 379 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 CLN3Q13286 438 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 ARL6IP1Q15041 203 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 RBMXL1Q96E39 390 aaKnown RBP11.94□□□□□ -0.5
NPHP4-207ENST00000470763 RALGAPA1Q6GYQ0 2036 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 A0A1W2PQD3 144 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 BLACEA4D250 179 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 FAM221BA6H8Z2 402 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 CTSEP14091 401 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 HNRNPA2B1P22626 353 aaKnown RBP11.94□□□□□ -0.5
NPHP4-207ENST00000470763 KIR2DL1P43626 348 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-207ENST00000470763 FOXL2P58012 376 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 VAMP2P63027 116 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 TLE4Q04727 773 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 PDCD1Q15116 288 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 C1orf189Q5VU69 101 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 OR13H1Q8NG92 308 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 OIT3Q8WWZ8 545 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 TM2D1Q9BX74 207 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 LAMP3Q9UQV4 416 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 MMACHCQ9Y4U1 282 aa11.94□□□□□ -0.5
NPHP4-207ENST00000470763 TRBV24-1A0A075B6N3 115 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 HLA-HP01893 362 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 ERVS71-1P61550 626 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 PMS2P11Q13670 270 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 SP5Q6BEB4 398 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-207ENST00000470763 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 PLEKHF2Q9H8W4 249 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 A6NNC1 897 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 TMEM50AO95807 157 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 HOXA6P31267 233 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 PAX5Q02548 391 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 ZP4Q12836 540 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 ZNF66Q6ZN08 573 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 YAF2Q8IY57 180 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 THAP3Q8WTV1 239 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-207ENST00000470763 RPP25Q9BUL9 199 aaKnown RBP11.93□□□□□ -0.5
NPHP4-207ENST00000470763 WWTR1Q9GZV5 400 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 PNRC2Q9NPJ4 139 aaKnown RBP11.93□□□□□ -0.5
NPHP4-207ENST00000470763 IL17BQ9UHF5 180 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 PIGLQ9Y2B2 252 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 HOXB2P14652 356 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 PCP4P48539 62 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 SLC16A14Q7RTX9 510 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 SLC22A18ASQ8N1D0 253 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 Q96M66 194 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-207ENST00000470763 B3GAT1Q9P2W7 334 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 FRYLO94915 3013 aa11.93□□□□□ -0.5
NPHP4-207ENST00000470763 H3BP45 60 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 M0R296 226 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 OPN1MWP04001 364 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 OPN1MW2P0DN77 364 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 OPN1MW3P0DN78 364 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 CCL1P22362 96 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 PRSS8Q16651 343 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 THNSL2Q86YJ6 484 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 MRPL41Q8IXM3 137 aaKnown RBP11.92□□□□□ -0.5
NPHP4-207ENST00000470763 GPR137CQ8N3F9 429 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 SYT3Q9BQG1 590 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 C11orf1Q9H5F2 150 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 SDF2L1Q9HCN8 221 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 PPP1R14DQ9NXH3 145 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 PIAS3Q9Y6X2 628 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 ZNF732B4DXR9 585 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 ADIRFQ15847 76 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 SLC25A24Q6NUK1 477 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 RTL10Q7L3V2 364 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 GNPNAT1Q96EK6 184 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-207ENST00000470763 MRPL13Q9BYD1 178 aaKnown RBP11.92□□□□□ -0.5
NPHP4-207ENST00000470763 GPR173Q9NS66 373 aa11.92□□□□□ -0.5
NPHP4-207ENST00000470763 MARCH11A6NNE9 402 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 TNFRSF10CO14798 259 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 TGOLN2O43493 480 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 ADAM20O43506 726 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 TNFP01375 233 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 HBE1P02100 147 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 THEM4Q5T1C6 240 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 VSIRQ9H7M9 311 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 A0A1W2PQF6 199 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 M0R143 59 aa11.91□□□□□ -0.5
NPHP4-207ENST00000470763 GCGP01275 180 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms