RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 KHDRBS3O75525 346 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GLSO94925 669 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 UTS2O95399 124 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SERPINA1P01009 418 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 TSPAN19P0C672 248 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GKN3PP0CG01 181 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 UBBP0CG47 229 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 UBCP0CG48 685 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SLC2A2P11168 524 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 PIPP12273 146 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ADCYAP1P18509 176 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CXCL3P19876 107 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GDF1P27539 372 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 HSD11B1P28845 292 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 MPGP29372 298 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SSTR2P30874 369 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SDC2P34741 201 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CRYBB2P43320 205 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GLIPR1P48060 266 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 POLR2JP52435 117 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 KLF3P57682 345 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ZP1P60852 638 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SEC61A1P61619 476 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 RPS27AP62979 156 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 UBA52P62987 128 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 VLDLRP98155 873 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 IL5RAQ01344 420 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 TLE4Q04727 773 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CHRNB3Q05901 458 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SRSF1Q07955 248 aaKnown RBP eCLIP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF415Q09FC8 603 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 FUT5Q11128 374 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SKP2Q13309 424 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SURF2Q15527 256 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 PSG3Q16557 428 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 C3AR1Q16581 482 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GSG1Q2KHT4 349 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 MESTQ5EB52 335 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ENTPD8Q5MY95 495 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ELFN2Q5R3F8 820 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 DCST2Q5T1A1 773 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OTUD3Q5T2D3 398 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 TRIQKQ629K1 86 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 RTL6Q6ICC9 239 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR8G2PQ6IF36 304 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 VWA1Q6PCB0 445 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 APOOLQ6UXV4 268 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 TMUB2Q71RG4 321 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 TCF24Q7RTU0 167 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 C6orf120Q7Z4R8 191 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 C5orf24Q7Z6I8 188 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 MARCH3Q86UD3 253 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CYP4Z1Q86W10 505 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 MMD2Q8IY49 270 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 Q8N402 240 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ACBD7Q8N6N7 88 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CDRT4Q8N9R6 151 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SEMA6DQ8NFY4 1073 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR10H4Q8NGA5 316 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR51L1Q8NGJ5 315 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR51G2Q8NGK0 314 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR13C8Q8NGS7 320 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR2G2Q8NGZ5 317 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR4Q3Q8NH05 313 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SFXN5Q8TD22 340 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 APH1BQ8WW43 257 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 HPSE2Q8WWQ2 592 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 TMEM37Q8WXS4 190 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 RAB8BQ92930 207 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 LRRC58Q96CX6 371 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 C10orf35Q96D05 121 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SLC35G5Q96KT7 338 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GNRHR2Q96P88 292 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR7D2Q96RA2 312 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CNN2Q99439 309 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 KLHDC3Q9BQ90 382 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SNHG12Q9BXW3 62 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GABARAPL3Q9BY60 117 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ANGPTL4Q9BY76 406 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ACTR3CQ9C0K3 210 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CSTL1Q9H114 145 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR51I1Q9H343 314 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ABCB9Q9NP78 766 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ACKR4Q9NPB9 350 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ISYNA1Q9NPH2 558 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CCDC167Q9P0B6 97 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 NTMQ9P121 344 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SPRR3Q9UBC9 169 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF629Q9UEG4 869 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SMPXQ9UHP9 88 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 BOKQ9UMX3 212 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SAMD4AQ9UPU9 718 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 GSTK1Q9Y2Q3 226 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 WIF1Q9Y5W5 379 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 LRRK2Q5S007 2527 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 UTP20O75691 2785 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 NCKAP5O14513 1909 aa3.9□□□□□ -1.78
SF3B1-202ENST00000409915 TRGV8A0A0C4DH27 118 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM269A0A1B0GVZ9 245 aa3.9□□□□□ -1.79
SF3B1-202ENST00000409915 C9orf118A6NHY6 69 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms