RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 OR51I2Q9H344 312 aa12.84□□□□□ -0.35
SCAF11-204ENST00000395454 PLK3Q9H4B4 646 aa12.84□□□□□ -0.35
SCAF11-204ENST00000395454 PLCE1Q9P212 2302 aa12.84□□□□□ -0.35
SCAF11-204ENST00000395454 OPN4Q9UHM6 478 aa12.84□□□□□ -0.35
SCAF11-204ENST00000395454 ZNF230Q9UIE0 474 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-204ENST00000395454 ANXA10Q9UJ72 324 aa12.84□□□□□ -0.35
SCAF11-204ENST00000395454 IGKV1D-8A0A087WSZ0 117 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 IGHV2OR16-5A0A0B4J2B6 119 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 SIAH2O43255 324 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 SELEP16581 610 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 BCL3P20749 454 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 DNASE1P24855 282 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCAF11-204ENST00000395454 C2orf68Q2NKX9 166 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 NCMAPQ5T1S8 102 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 ZNF660Q6AZW8 331 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-204ENST00000395454 ADAM5Q6NVV9 412 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 LPCAT3Q6P1A2 487 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 SLC22A25Q6T423 547 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 C12orf45Q8N5I9 185 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-204ENST00000395454 MITD1Q8WV92 249 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 MARS2Q96GW9 593 aaKnown RBP12.83□□□□□ -0.36
SCAF11-204ENST00000395454 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 SPOCK3Q9BQ16 436 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 OR2J1Q9GZK6 312 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 PPA2Q9H2U2 334 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 IFT22Q9H7X7 185 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 MGAT4AQ9UM21 535 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 CENPEQ02224 2701 aa12.83□□□□□ -0.36
SCAF11-204ENST00000395454 A0A1B0GWJ7 208 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 DEFB108AA8MXU0 73 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 ATP6V1G2-DDX39BF2Z307 99 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 SNAPC5O75971 98 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 CD3EP07766 207 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 COL8A1P27658 744 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 UNQ6126/PRO20091Q6UXV3 157 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 BHLHE23Q8NDY6 225 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 SLC25A40Q8TBP6 338 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 SLAMF9Q96A28 289 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 SCGB3A2Q96PL1 93 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 CMSS1Q9BQ75 279 aaKnown RBP12.82□□□□□ -0.36
SCAF11-204ENST00000395454 HDHD3Q9BSH5 251 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-204ENST00000395454 C5orf66Q9H5L9 145 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 C12orf4Q9NQ89 552 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 ITGB1BP2Q9UKP3 347 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 C9orf170A2RU37 121 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 F8VVB4 439 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 F8VWA3 439 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 J3QT63 122 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 HLA-AP01891 365 aaKnown RBP12.82□□□□□ -0.36
SCAF11-204ENST00000395454 GSTT2P0CG29 244 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 COX6B1P14854 86 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 ECI1P42126 302 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 OR3A3P47888 321 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 PPP1R1AQ13522 171 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 IL13RA2Q14627 380 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 CHRFAM7AQ494W8 412 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 LY6G6FQ5SQ64 297 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 C17orf107Q6ZR85 190 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 MARCH1Q8TCQ1 289 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 GTF3AQ92664 365 aaKnown RBP12.82□□□□□ -0.36
SCAF11-204ENST00000395454 RTL8AQ9BWD3 113 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 ZNF701Q9NV72 531 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-204ENST00000395454 HSPB11Q9Y547 144 aa12.82□□□□□ -0.36
SCAF11-204ENST00000395454 TACC2O95359 2948 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 LRP5LA4QPB2 252 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 TRAPPC2LH3BP13 241 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 DUS4LO95620 317 aaKnown RBP12.81□□□□□ -0.36
SCAF11-204ENST00000395454 ACAA1P09110 424 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-204ENST00000395454 CA6P23280 308 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 PSG7Q13046 419 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 TMEM128Q5BJH2 165 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 SPATA46Q5T0L3 261 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 Q6ZPA2 131 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 OR5M8Q8NGP6 311 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 KLF14Q8TD94 323 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-204ENST00000395454 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 DHRS9Q9BPW9 319 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 EHFQ9NZC4 300 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 PTPN13Q12923 2485 aa12.81□□□□□ -0.36
SCAF11-204ENST00000395454 PLSCR5A0PG75 271 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 DBX1A6NMT0 343 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 SYNGR1O43759 233 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 OR7C1O76099 320 aaPredicted RBP12.8□□□□□ -0.36
SCAF11-204ENST00000395454 NAPSAO96009 420 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 GLAP06280 429 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 KITLGP21583 273 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 ERVS71-1P61550 626 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 TSPAN5P62079 268 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 HAGHLQ6PII5 290 aaPredicted RBP12.8□□□□□ -0.36
SCAF11-204ENST00000395454 DHRS11Q6UWP2 260 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 WDR86Q86TI4 376 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 ADAD2Q8NCV1 583 aaKnown RBP12.8□□□□□ -0.36
SCAF11-204ENST00000395454 OR1J1Q8NGS3 322 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 TMEM230Q96A57 120 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 MICU1Q9BPX6 476 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 BCL2L14Q9BZR8 327 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 RNF115Q9Y4L5 304 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
SCAF11-204ENST00000395454 TMEM210A6NLX4 147 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms