RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 DBX2Q6ZNG2 339 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 VN1R17PQ8TDU5 208 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 METTL1Q9UBP6 276 aaKnown RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 MMP17Q9ULZ9 603 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 CREBBPQ92793 2442 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 TRBV5-7A0A0A0MS05 114 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 FTCDNL1E5RQL4 147 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 CDX1P47902 265 aaPredicted RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 BLKP51451 505 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 ERVFRD-1P60508 538 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HLA-DRB3P79483 266 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 DPPA3Q6W0C5 159 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HOGA1Q86XE5 327 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 OR5D13Q8NGL4 314 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 DTD1Q8TEA8 209 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 TMEM230Q96A57 120 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 C14orf144Q96I85 54 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 VPS25Q9BRG1 176 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 PECRQ9BY49 303 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 SLC25A31Q9H0C2 315 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 FGF21Q9NSA1 209 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 DMRT1Q9Y5R6 373 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 CXorf51AA0A1B0GTR3 108 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 CLDN34H7C241 214 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 M0R296 226 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 ZIC3O60481 467 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 YRDCQ86U90 279 aaKnown RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 EIF4E3Q8N5X7 224 aaKnown RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 MS4A10Q96PG2 267 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 ALX4Q9H161 411 aaPredicted RBP7.72□□□□□ -1.17
RTN4-206ENST00000394611 CYTL1Q9NRR1 136 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 HS3ST3B1Q9Y662 390 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 DMDP11532 3685 aa7.72□□□□□ -1.17
RTN4-206ENST00000394611 LYPD3O95274 346 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 IFNA1P01562 189 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.17
RTN4-206ENST00000394611 AADACP22760 399 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 THBS3P49746 956 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 RPP30P78346 268 aaKnown RBP7.71□□□□□ -1.17
RTN4-206ENST00000394611 CALHM1Q8IU99 346 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 RPS4Y2Q8TD47 263 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 MRGPRX1Q96LB2 322 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 PARP11Q9NR21 331 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 PPIAL4AQ9Y536 164 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 ARFGEF3Q5TH69 2177 aa7.71□□□□□ -1.17
RTN4-206ENST00000394611 PLPP3O14495 311 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 ST8SIA5O15466 376 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 GALR1P47211 349 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 TMEM50BP56557 158 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 ZNF816Q0VGE8 651 aaPredicted RBP7.71□□□□□ -1.18
RTN4-206ENST00000394611 FAM189A2Q15884 450 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 IGFBP7Q16270 282 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 SLC46A1Q96NT5 459 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 DDA1Q9BW61 102 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 PLEKHA2Q9HB19 425 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 A0A1B0GTI1 187 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 SLC31A2O15432 143 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 ASAH2BP0C7U1 165 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 HIST1H3AP68431 136 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 GGTLC2Q14390 218 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 DTWD2Q8NBA8 298 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 OR10G3Q8NGC4 313 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 LIPHQ8WWY8 451 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 CLDN23Q96B33 292 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 ZNF488Q96MN9 340 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 SPIN2AQ99865 258 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 SPIN2BQ9BPZ2 258 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 USF3Q68DE3 2245 aa7.71□□□□□ -1.18
RTN4-206ENST00000394611 UBE2CO00762 179 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 CST2P09228 141 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 GABRG2P18507 467 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 PKIAP61925 76 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 ZNF92Q03936 586 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 MST1LQ2TV78 715 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 SSX7Q7RTT5 188 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 CXorf67Q86X51 503 aaPredicted RBP7.7□□□□□ -1.18
RTN4-206ENST00000394611 PAQR4Q8N4S7 273 aaPredicted RBP7.7□□□□□ -1.18
RTN4-206ENST00000394611 SPTSSAQ969W0 71 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 TCTN2Q96GX1 697 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 ICAM5Q9UMF0 924 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 PCNX3Q9H6A9 2034 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 A0A1W2PPV4 95 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 AQP7P3A6NL99 342 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 FAM157CP0CG43 387 aa7.7□□□□□ -1.18
RTN4-206ENST00000394611 IL2RGP31785 369 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms