RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 FGF12P61328 243 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 BATFQ16520 125 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 PLA2G2CQ5R387 149 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 GLRX5Q86SX6 157 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 NHLRC2Q8NBF2 726 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 FLVCR1Q9Y5Y0 555 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 KCNE3Q9Y6H6 103 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 NUP205Q92621 2012 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 LIMS1P48059 325 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 RPL30P62888 115 aaKnown RBP8□□□□□ -1.13
LIMCH1-202ENST00000381753 Q6ZSR9 355 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 LRP12Q9Y561 859 aa8□□□□□ -1.13
LIMCH1-202ENST00000381753 IGKV3D-11A0A0A0MRZ8 115 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 F8W036 122 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 PTP4A3O75365 173 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 HLA-AP01891 365 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 IGKV3-11P04433 115 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 PPOXP50336 477 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 ELLP55199 621 aaPredicted RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 AESQ08117 197 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 BTF3L4Q96K17 158 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 BCL2L10Q9HD36 194 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 PRAF2O60831 178 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 APOC3P02656 99 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 OR13C7P0DN81 318 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 HNRNPFP52597 415 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 LSM6P62312 80 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 CD226Q15762 336 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 TEAD3Q99594 435 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 A0A0G2JNJ9 132 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 ZC3H12DA2A288 527 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 FUCA1P04066 466 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 TSPOP30536 169 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 GK2Q14410 553 aaPredicted RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 ZIC4Q8N9L1 334 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 BLNKQ8WV28 456 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 VWCEQ96DN2 955 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 GORASP2Q9H8Y8 452 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 DOK5Q9P104 306 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 Q9UFV3 132 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF107Q9UII5 783 aaPredicted RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 LYNX1G3V0Z9 82 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 MGST3O14880 152 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 TYROBPO43914 113 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 LYNX1P0DP58 116 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 RAB6AP20340 208 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 BCL3P20749 454 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 TIMP3P35625 211 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 RELQ04864 619 aaPredicted RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 FOXL1Q12952 345 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 UBE3DQ7Z6J8 389 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 KLF14Q8TD94 323 aaPredicted RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 WBP1Q96G27 269 aa7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 INTS1Q8N201 2190 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-202ENST00000381753 A0A1B0GU03 582 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 C1orf196B1AJZ1 125 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 CDK1P06493 297 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 IL7P13232 177 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 Q6ZS92 163 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 CALHM1Q8IU99 346 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 C20orf196Q8IYI0 205 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 WDYHV1Q96HA8 205 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 ABCA4P78363 2273 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 KIAA1324LA8MWY0 1029 aaPredicted RBP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 GPR32P1Q8NGA4 272 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNRF4Q8WWF5 429 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 CMC2Q9NRP2 79 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 HPXP02790 462 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 PMS2P11Q13670 270 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 OR4A47Q6IF82 309 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 BIVMQ86UB2 503 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 RNF166Q96A37 237 aaPredicted RBP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 PATZ1Q9HBE1 687 aaKnown RBP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 WASHC3Q9Y3C0 194 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 QSER1Q2KHR3 1735 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 ICE1Q9Y2F5 2266 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 SLC31A2O15432 143 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 RFPL3SP0C7P2 107 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 DHODHQ02127 395 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 TUSC1Q2TAM9 212 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 SOHLH1Q5JUK2 328 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 BHLHA9Q7RTU4 235 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF525Q8N782 197 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 A0A0B4J2E0 115 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 A0A1B0GX12 115 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF354AO60765 605 aaPredicted RBP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 HBE1P02100 147 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 KLK2P20151 261 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 RPL13AP40429 203 aaKnown RBP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 LPAR6P43657 344 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 GP2P55259 537 aaKnown RBP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 OR5A2Q8NGI9 324 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 OR9G1Q8NH87 305 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 RPS10P5Q9NQ39 176 aa7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 KLF2Q9Y5W3 355 aaPredicted RBP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
LIMCH1-202ENST00000381753 PSPNO60542 156 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 GPX5O75715 221 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 WNT2P09544 360 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms