RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TSC22D2O75157 780 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 RGS11O94810 467 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 CRYAAP02489 173 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 GMFBP60983 142 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 Q6P435 159 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 CLEC18BQ6UXF7 455 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 C11orf53Q8IXP5 236 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 DPCDQ9BVM2 203 aaPredicted RBP16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 CXXC4Q9H2H0 198 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 IFT22Q9H7X7 185 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 C14orf166Q9Y224 244 aaKnown RBP16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 DEGS1O15121 323 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 KNG1P01042 644 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 SSTR2P30874 369 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 FCGR2CP31995 323 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 SLC9A3R2Q15599 337 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 MSMPQ1L6U9 139 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 LPCAT3Q6P1A2 487 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 Q6ZS49 121 aa16.84■□□□□ 0.29
PDLIM5-205ENST00000380180 DBX1A6NMT0 343 aa16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 NXPH2O95156 264 aa16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 ZNF44P15621 663 aa16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 ZNF81P51508 661 aa16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 SRSF7Q16629 238 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 C5orf24Q7Z6I8 188 aa16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 CLEC4MQ9H2X3 399 aaPredicted RBP16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 TUBD1Q9UJT1 453 aa16.83■□□□□ 0.28
PDLIM5-205ENST00000380180 NOS1APO75052 506 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 GLAP06280 429 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 RPS2P15880 293 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 SRSF4Q08170 494 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 RBM39Q14498 530 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 IGSF11Q5DX21 431 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 ZNF826PQ6ZT77 177 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 LRP11Q86VZ4 500 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 GTF3AQ92664 365 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 SEC22AQ96IW7 307 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 DUSP13Q9UII6 198 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 SPEF1Q9Y4P9 236 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 KIAA2026Q5HYC2 2103 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 PLCE1Q9P212 2302 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 CTSDP07339 412 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 ACAA1P09110 424 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 NFYAP23511 347 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 RBPJQ06330 500 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 C20orf204Q6ZNR8 217 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 SPERTQ8NA61 448 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 RELL2Q8NC24 303 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 TOMM40LQ969M1 308 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 PDCD10Q9BUL8 212 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 ELOVL5Q9NYP7 299 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 PRR13Q9NZ81 148 aa16.82■□□□□ 0.28
PDLIM5-205ENST00000380180 FAM25EA8MYX2 175 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 ZNF250P15622 560 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 CCKARP32238 428 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 FXYD4P59646 89 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 SORDQ00796 357 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 PRAMEF6Q5VXH4 476 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 MRPL30Q8TCC3 161 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 DHRS9Q9BPW9 319 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 FXYD6Q9H0Q3 95 aa16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 RIMS4Q9H426 269 aaPredicted RBP16.81■□□□□ 0.28
PDLIM5-205ENST00000380180 A0A1B0GWJ7 208 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 OR2H2O95918 312 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 CD8AP01732 235 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 SCTP09683 121 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 ZNF728P0DKX0 622 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 CXCL2P19875 107 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 GLRXP35754 106 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 NKX6-1P78426 367 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 ZNF146Q15072 292 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 ANKRD55Q3KP44 614 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 POC1AQ8NBT0 407 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 C16orf97H3BN30 126 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 SIRPB1O00241 398 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 GLP1RP43220 463 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 SEC61A1P61619 476 aaKnown RBP16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 C1QTNF12Q5T7M4 302 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 TLNRD1Q9H1K6 362 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 HES4Q9HCC6 221 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 UFSP2Q9NUQ7 469 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 JKAMPQ9P055 326 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 ATP23Q9Y6H3 246 aa16.8■□□□□ 0.28
PDLIM5-205ENST00000380180 TRAV14DV4A0A0A6YYC5 116 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 A0A0B4J2A0 478 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 A6NLC8 198 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 HMSDA8MTL9 139 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 TRDCB7Z8K6 153 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 ATP6V1G2-DDX39BF2Z307 99 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 SLC33A1O00400 549 aaPredicted RBP16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 SH2D1BO14796 132 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 VHLLQ6RSH7 139 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 COQ8AQ8NI60 647 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 ELMOD3Q96FG2 381 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 HEXA-AS1Q9H8Q6 139 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 SHPKQ9UHJ6 478 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 FXYD6-FXYD2A0A087WZ82 144 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 TRBV6-6A0A0A6YYG2 114 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 RFPL4AA6NLU0 287 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 RFPL4AL1F8VTS6 287 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms