RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 GPR176Q14439 515 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 ATXN7L3Q14CW9 347 aaPredicted RBP9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 GPR107Q5VW38 600 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 OR51T1Q8NGJ9 327 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 DCTN5Q9BTE1 182 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 BEX2Q9BXY8 128 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 IL36GQ9NZH8 169 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 AUP1Q9Y679 476 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 IFITM5A6NNB3 132 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 SLC33A1O00400 549 aaPredicted RBP9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 ENSAO43768 121 aaKnown RBP9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 ERVFRD-1P60508 538 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 VBP1P61758 197 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 NCS1P62166 190 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 RAB11BQ15907 218 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 TIMM50Q3ZCQ8 353 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 Q6P435 159 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 PDZD9Q8IXQ8 264 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 OR8H2Q8N162 312 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 C22orf15Q8WYQ4 148 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 SLC25A28Q96A46 364 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 CST11Q9H112 138 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 RHOFQ9HBH0 211 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 PCDHB16Q9NRJ7 776 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 DAPK2Q9UIK4 370 aa9.68□□□□□ -0.86
DEPDC4-202ENST00000378244 TRAV24A0A0B4J272 114 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 OR3A1P47881 315 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 PSMD7P51665 324 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 UNC119Q13432 240 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 PAN3Q58A45 887 aaKnown RBP9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 Q8NFD4 153 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 NEK7Q8TDX7 302 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 DACT3Q96B18 629 aaPredicted RBP9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 FAM3DQ96BQ1 224 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 SNX22Q96L94 193 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 MRI1Q9BV20 369 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 LIN7BQ9HAP6 207 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 POLR3KQ9Y2Y1 108 aaPredicted RBP9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 ECDO95905 644 aaPredicted RBP9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 CCL3L1P16619 93 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 CPT2P23786 658 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 GLIPR1P48060 266 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 BMXP51813 675 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 PLA2G7Q13093 441 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 C2orf76Q3KRA6 126 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 GPR141Q7Z602 305 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 NICN1Q9BSH3 213 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 TMEM59Q9BXS4 323 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 SIRT7Q9NRC8 400 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 STEAP1Q9UHE8 339 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 OPN4Q9UHM6 478 aa9.67□□□□□ -0.86
DEPDC4-202ENST00000378244 LIPFP07098 398 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 GATA3P23771 443 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 LMO1P25800 156 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 SRP14P37108 136 aaKnown RBP9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 NKAPLQ5M9Q1 402 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 TMEM200BQ69YZ2 307 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 SUMF2Q8NBJ7 301 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 OR5D13Q8NGL4 314 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 KCNG3Q8TAE7 436 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 FAM234AQ9H0X4 552 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 GHRLQ9UBU3 117 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 TRAV39A0A0B4J263 110 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 TOX4O94842 621 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 UBBP0CG47 229 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 CD37P11049 281 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 PAX8Q06710 450 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 ZNF273Q14593 569 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 IL13RA2Q14627 380 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 CHRFAM7AQ494W8 412 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 METTL11BQ5VVY1 283 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 TRAPPC6BQ86SZ2 158 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 CHST4Q8NCG5 386 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 PPP1R35Q8TAP8 253 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 MRPS24Q96EL2 167 aaKnown RBP9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 DPCDQ9BVM2 203 aaPredicted RBP9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 SCOCQ9UIL1 159 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 PEX16Q9Y5Y5 336 aa9.66□□□□□ -0.86
DEPDC4-202ENST00000378244 KIAA2026Q5HYC2 2103 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 NOTOA8MTQ0 251 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 AIPO00170 330 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 MGST3O14880 152 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 PAHP00439 452 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 HNF1AP20823 631 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 RPS19P39019 145 aaKnown RBP9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 ALDH3B2P48448 385 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 KRBOX4Q5JUW0 171 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 RAB12Q6IQ22 244 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 SFXN4Q6P4A7 337 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 GDPGP1Q6ZNW5 385 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 SLC16A12Q6ZSM3 486 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 RTN4RL2Q86UN3 420 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 TPRA1Q86W33 373 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 Q96M66 194 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 WDFY2Q96P53 400 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 CDC42EP3Q9UKI2 254 aa9.65□□□□□ -0.86
DEPDC4-202ENST00000378244 C2CD3Q4AC94 2353 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 TRAV40A0A0B4J280 105 aa9.65□□□□□ -0.87
DEPDC4-202ENST00000378244 UBE2QL1A1L167 161 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms