RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 FAM185AQ8N0U4 392 aa21.78■■□□□ 1.08
C9orf40-201ENST00000376854 TCEAL3Q969E4 200 aa21.78■■□□□ 1.08
C9orf40-201ENST00000376854 C12orf57Q99622 126 aa21.78■■□□□ 1.08
C9orf40-201ENST00000376854 TMEM222Q9H0R3 208 aa21.78■■□□□ 1.08
C9orf40-201ENST00000376854 SLC7A10Q9NS82 523 aa21.78■■□□□ 1.08
C9orf40-201ENST00000376854 FAM86C1Q9NVL1 165 aa21.78■■□□□ 1.08
C9orf40-201ENST00000376854 COA4Q9NYJ1 87 aa21.78■■□□□ 1.08
C9orf40-201ENST00000376854 TRDCB7Z8K6 153 aa21.77■■□□□ 1.08
C9orf40-201ENST00000376854 ASCL1P50553 236 aa21.77■■□□□ 1.08
C9orf40-201ENST00000376854 GFRA1P56159 465 aa21.77■■□□□ 1.08
C9orf40-201ENST00000376854 EWSR1Q01844 656 aaKnown RBP eCLIP21.77■■□□□ 1.08
C9orf40-201ENST00000376854 AWAT1Q58HT5 328 aa21.77■■□□□ 1.08
C9orf40-201ENST00000376854 BOD1Q96IK1 185 aa21.77■■□□□ 1.08
C9orf40-201ENST00000376854 SHANK1Q9Y566 2161 aa21.77■■□□□ 1.08
C9orf40-201ENST00000376854 CDS2O95674 445 aa21.77■■□□□ 1.07
C9orf40-201ENST00000376854 BCL3P20749 454 aa21.77■■□□□ 1.07
C9orf40-201ENST00000376854 CYB561P49447 251 aa21.77■■□□□ 1.07
C9orf40-201ENST00000376854 COLCA1Q6ZS62 124 aa21.77■■□□□ 1.07
C9orf40-201ENST00000376854 OR56B2PQ8NGI1 322 aa21.77■■□□□ 1.07
C9orf40-201ENST00000376854 POM121Q96HA1 1249 aa21.77■■□□□ 1.07
C9orf40-201ENST00000376854 SPACA1Q9HBV2 294 aa21.77■■□□□ 1.07
C9orf40-201ENST00000376854 NOSIPQ9Y314 301 aaKnown RBP21.77■■□□□ 1.07
C9orf40-201ENST00000376854 MRPS18CQ9Y3D5 142 aaKnown RBP21.77■■□□□ 1.07
C9orf40-201ENST00000376854 SNRNP70P08621 437 aaKnown RBP21.76■■□□□ 1.07
C9orf40-201ENST00000376854 CCNOP22674 350 aa21.76■■□□□ 1.07
C9orf40-201ENST00000376854 SPIN3Q5JUX0 258 aa21.76■■□□□ 1.07
C9orf40-201ENST00000376854 TBC1D26Q86UD7 250 aa21.76■■□□□ 1.07
C9orf40-201ENST00000376854 C1orf210Q8IVY1 113 aa21.76■■□□□ 1.07
C9orf40-201ENST00000376854 SLAMF9Q96A28 289 aa21.76■■□□□ 1.07
C9orf40-201ENST00000376854 USB1Q9BQ65 265 aaKnown RBP21.76■■□□□ 1.07
C9orf40-201ENST00000376854 UBE2J1Q9Y385 318 aaPredicted RBP21.76■■□□□ 1.07
C9orf40-201ENST00000376854 MRPL33O75394 65 aaKnown RBP21.75■■□□□ 1.07
C9orf40-201ENST00000376854 RAB5BP61020 215 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 TMEM182Q6ZP80 229 aaPredicted RBP21.75■■□□□ 1.07
C9orf40-201ENST00000376854 OR2C3Q8N628 320 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 Q8NFD4 153 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 TMEM45BQ96B21 275 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 EGLN1Q9GZT9 426 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 RYDENQ9NUL5 291 aaKnown RBP21.75■■□□□ 1.07
C9orf40-201ENST00000376854 MED19A0JLT2 244 aaPredicted RBP21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A10PA6NDY2 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A18PA6NE21 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A16PA6NEW6 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A20PA6NIJ5 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A8PA6NJQ4 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A7PA6NKC0 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A22PA8MWA6 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A12PA8MX19 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A5PA8MXJ8 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A23PA8MXZ1 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A15PP0C7V4 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A13PP0C7W8 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A14PP0C7W9 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 FAM90A24PP0C7X0 464 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 HABP2Q14520 560 aaPredicted RBP21.75■■□□□ 1.07
C9orf40-201ENST00000376854 NRN1LQ496H8 165 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 TIPARPQ7Z3E1 657 aaKnown RBP21.75■■□□□ 1.07
C9orf40-201ENST00000376854 C5orf24Q7Z6I8 188 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 ZNF695Q8IW36 515 aa21.75■■□□□ 1.07
C9orf40-201ENST00000376854 C7orf77A4D0Y5 90 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 FAM24AA6NFZ4 105 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 ZNHIT1O43257 154 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 TK1P04183 234 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 HAAOP46952 286 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 ARF1P84077 181 aaKnown RBP21.74■■□□□ 1.07
C9orf40-201ENST00000376854 PRDX4Q13162 271 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 C9orf135Q5VTT2 229 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 SUMF1Q8NBK3 374 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 SFT2D1Q8WV19 159 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 HIST1H2BAQ96A08 127 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 C11orf1Q9H5F2 150 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 PCSK5Q92824 1860 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 M0R036 132 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 ZNF44P15621 663 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 LMO1P25800 156 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 NKX2-1P43699 371 aaPredicted RBP21.74■■□□□ 1.07
C9orf40-201ENST00000376854 DCAF12Q5T6F0 453 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 Q6ZS49 121 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 FAM213BQ8TBF2 198 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 Q9N2K0 584 aa21.74■■□□□ 1.07
C9orf40-201ENST00000376854 A0A096LPE4 126 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 A0A1W2PPZ6 126 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 IFNA4P05014 189 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 PTAFRP25105 342 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 GPM6AP51674 278 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 POLR2GP62487 172 aaKnown RBP eCLIP21.73■■□□□ 1.07
C9orf40-201ENST00000376854 ZXDAP98168 799 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 CLINT1Q14677 625 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 TMEM105Q8N8V8 129 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 ZNF565Q8N9K5 539 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 KDF1Q8NAX2 398 aaPredicted RBP21.73■■□□□ 1.07
C9orf40-201ENST00000376854 TMEM56Q96MV1 263 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 PBDC1Q9BVG4 233 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 REPIN1Q9BWE0 567 aaKnown RBP21.73■■□□□ 1.07
C9orf40-201ENST00000376854 FGF23Q9GZV9 251 aaPredicted RBP21.73■■□□□ 1.07
C9orf40-201ENST00000376854 ATPIF1Q9UII2 106 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 TMEM56-RWDD3S4R434 201 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 B4E171 279 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 SCTP09683 121 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 CCL2P13500 99 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms