RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 KLF13Q9Y2Y9 288 aaPredicted RBP15.36■□□□□ 0.05
TRAF3IP1-201ENST00000373327 MED13Q9UHV7 2174 aa15.36■□□□□ 0.05
TRAF3IP1-201ENST00000373327 CD74P04233 296 aa15.36■□□□□ 0.05
TRAF3IP1-201ENST00000373327 PTX4Q96A99 478 aa15.36■□□□□ 0.05
TRAF3IP1-201ENST00000373327 RBMXL1Q96E39 390 aaKnown RBP15.36■□□□□ 0.05
TRAF3IP1-201ENST00000373327 LHX6Q9UPM6 363 aa15.36■□□□□ 0.05
TRAF3IP1-201ENST00000373327 C3orf85A0A1B0GTC6 90 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SHOXO15266 292 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 AGFG2O95081 481 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 ARG1P05089 322 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 FCGR3AP08637 254 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SCTP09683 121 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 CHATP28329 748 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 MPGP29372 298 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 BMPERQ8N8U9 685 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TMEM178AQ8NBL3 297 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 E9PLN8 166 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 CDIPTO14735 213 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 PPYP01298 95 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 ZNF735P0CB33 412 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TBC1D26Q86UD7 250 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TPRX1Q8N7U7 411 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 OR2M7Q8NG81 312 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TCTEX1D2Q8WW35 142 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 MRPS24Q96EL2 167 aaKnown RBP15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 LYZL4Q96KX0 146 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 IL36RNQ9UBH0 155 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 MMP24Q9Y5R2 645 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 NPTNQ9Y639 398 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 GLAP06280 429 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SIGLEC12Q96PQ1 595 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 UQCC1Q9NVA1 299 aa15.35■□□□□ 0.05
TRAF3IP1-201ENST00000373327 MFNGO00587 321 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SYNGR1O43759 233 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 F2RL1P55085 397 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 DCAF10Q5QP82 559 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 PPP1R32Q7Z5V6 425 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 DEFB124Q8NES8 71 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 FGFBP3Q8TAT2 258 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 GPR27Q9NS67 375 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 EYSQ5T1H1 3165 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 RNF222A6NCQ9 220 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 CST4P01036 141 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 FOXG1P55316 489 aaPredicted RBP15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 MRPL14Q6P1L8 145 aaKnown RBP15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SLC35G3Q8N808 338 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 DMBX1Q8NFW5 382 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TREM2Q9NZC2 230 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TAGLN2P37802 199 aaKnown RBP15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 ECI1P42126 302 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 ZNF266Q14584 549 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 ZNF573Q86YE8 665 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 NMES1Q9C002 83 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SHARPINQ9H0F6 387 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 GUK1Q16774 197 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 MYPOPQ86VE0 399 aaPredicted RBP15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 CALHM1Q8IU99 346 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 PUSL1Q8N0Z8 303 aaKnown RBP15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TLNRD1Q9H1K6 362 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 FOXJ2Q9P0K8 574 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 PRSS50Q9UI38 385 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TINAGQ9UJW2 476 aa15.34■□□□□ 0.05
TRAF3IP1-201ENST00000373327 CST2P09228 141 aa15.33■□□□□ 0.05
TRAF3IP1-201ENST00000373327 METTL15P1P0C7V9 234 aa15.33■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SELENOVP59797 346 aa15.33■□□□□ 0.05
TRAF3IP1-201ENST00000373327 FAHD2BQ6P2I3 314 aaPredicted RBP15.33■□□□□ 0.05
TRAF3IP1-201ENST00000373327 FAHD2AQ96GK7 314 aa15.33■□□□□ 0.05
TRAF3IP1-201ENST00000373327 SLC26A1Q9H2B4 701 aa15.33■□□□□ 0.05
TRAF3IP1-201ENST00000373327 PLEKHA2Q9HB19 425 aa15.33■□□□□ 0.05
TRAF3IP1-201ENST00000373327 TRANK1O15050 2925 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TRIM77I1YAP6 450 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 HPP00738 406 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 CTSDP07339 412 aaPredicted RBP15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 RUNX1Q01196 453 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF766Q5HY98 468 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TIPARPQ7Z3E1 657 aaKnown RBP15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 FAM58AQ8N1B3 248 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 LAMA1P25391 3075 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 IGLV3-12A0A075B6K2 115 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SPAARA0A1B0GVQ0 90 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TAAR5O14804 337 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 KLF7O75840 302 aaPredicted RBP15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TMEM251Q8N6I4 163 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 OR1K1Q8NGR3 316 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 KCNMB2Q9Y691 235 aa15.33■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ARR3P36575 388 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SOX8P57073 446 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 C4orf17Q53FE4 359 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 RTL8AQ9BWD3 113 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 SMCO4Q9NRQ5 59 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 PTPRSQ13332 1948 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 A0A0U1RQV5 110 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TERTO14746 1132 aaKnown RBP15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 ZNF239Q16600 458 aaKnown RBP15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 VAX1Q5SQQ9 334 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 IMMP1LQ96LU5 166 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 TTTY12Q9BZ98 90 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 WNT5BQ9H1J7 359 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 LPAR3Q9UBY5 353 aa15.32■□□□□ 0.04
TRAF3IP1-201ENST00000373327 BAXQ07812 192 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms