RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ZNF286AQ9HBT8 521 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 KCNJ16Q9NPI9 418 aa19.3■□□□□ 0.68
PTX3-201ENST00000295927 SNRPGP15A8MWD9 76 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 OR4A8P0C604 315 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 RBM39Q14498 530 aaKnown RBP19.29■□□□□ 0.68
PTX3-201ENST00000295927 GRK1Q15835 563 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 ZNF626Q68DY1 528 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 FIP1L1Q6UN15 594 aaKnown RBP19.29■□□□□ 0.68
PTX3-201ENST00000295927 OR11H7Q8NGC8 314 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 ZNF69Q9UC07 566 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 SIRPB1O00241 398 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 SH2D1BO14796 132 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 CREBL2O60519 120 aaPredicted RBP19.29■□□□□ 0.68
PTX3-201ENST00000295927 GLRA1P23415 457 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 ACP7Q6ZNF0 438 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 C17orf107Q6ZR85 190 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 LHFPL1Q86WI0 220 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 MARCH1Q8TCQ1 289 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 CCDC107Q8WV48 283 aa19.29■□□□□ 0.68
PTX3-201ENST00000295927 MYOZ1Q9NP98 299 aaPredicted RBP19.29■□□□□ 0.68
PTX3-201ENST00000295927 RBMXP38159 391 aaKnown RBP19.28■□□□□ 0.68
PTX3-201ENST00000295927 LRRC29Q8WV35 223 aa19.28■□□□□ 0.68
PTX3-201ENST00000295927 DMRTB1Q96MA1 342 aa19.28■□□□□ 0.68
PTX3-201ENST00000295927 OR14J1Q9UGF5 321 aa19.28■□□□□ 0.68
PTX3-201ENST00000295927 RELNP78509 3460 aa19.28■□□□□ 0.68
PTX3-201ENST00000295927 SHISA9B4DS77 424 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 SLC33A1O00400 549 aaPredicted RBP19.27■□□□□ 0.68
PTX3-201ENST00000295927 IGHV1-46P01743 117 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 NPY4RP50391 375 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 SORDQ00796 357 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 C4orf46Q504U0 113 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 PAN3Q58A45 887 aaKnown RBP19.27■□□□□ 0.68
PTX3-201ENST00000295927 AADACL3Q5VUY0 350 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 DMRTC2Q8IXT2 367 aaPredicted RBP19.27■□□□□ 0.68
PTX3-201ENST00000295927 ITLN1Q8WWA0 313 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 Q9N2K0 584 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 NECAP2Q9NVZ3 263 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 ING3Q9NXR8 418 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 ADGRG4Q8IZF6 3080 aa19.27■□□□□ 0.68
PTX3-201ENST00000295927 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.27■□□□□ 0.67
PTX3-201ENST00000295927 HAND1O96004 215 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 OR4E1P0C645 316 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 SULT1A3P0DMM9 295 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 SULT1A4P0DMN0 295 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 OR5H8P0DN80 308 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 CXCL3P19876 107 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 CEBPDP49716 269 aaPredicted RBP19.27■□□□□ 0.67
PTX3-201ENST00000295927 ZDHHC8Q9ULC8 765 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 KALRNO60229 2985 aa19.27■□□□□ 0.67
PTX3-201ENST00000295927 CEACAM18A8MTB9 384 aa19.26■□□□□ 0.67
PTX3-201ENST00000295927 UQCRFS1P47985 274 aa19.26■□□□□ 0.67
PTX3-201ENST00000295927 SRSF7Q16629 238 aaKnown RBP eCLIP19.26■□□□□ 0.67
PTX3-201ENST00000295927 Q6ZS49 121 aa19.26■□□□□ 0.67
PTX3-201ENST00000295927 SLC25A42Q86VD7 318 aa19.26■□□□□ 0.67
PTX3-201ENST00000295927 MOGAT3Q86VF5 341 aa19.26■□□□□ 0.67
PTX3-201ENST00000295927 OR10Z1Q8NGY1 313 aa19.26■□□□□ 0.67
PTX3-201ENST00000295927 RIMS4Q9H426 269 aaPredicted RBP19.26■□□□□ 0.67
PTX3-201ENST00000295927 GSTT2P0CG29 244 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 GNLYP22749 145 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 TNFAIP6P98066 277 aaPredicted RBP19.25■□□□□ 0.67
PTX3-201ENST00000295927 TCTE3Q8IZS6 198 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 MUC20Q8N307 709 aaPredicted RBP19.25■□□□□ 0.67
PTX3-201ENST00000295927 MRPL30Q8TCC3 161 aaKnown RBP19.25■□□□□ 0.67
PTX3-201ENST00000295927 IL19Q9UHD0 177 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 GLS2Q9UI32 602 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 GPR132Q9UNW8 380 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 OR5H14A6NHG9 310 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 KNG1P01042 644 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 CD3EP07766 207 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 CFHR2P36980 270 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 SMIM21Q3B7S5 101 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 ZNF660Q6AZW8 331 aaPredicted RBP19.25■□□□□ 0.67
PTX3-201ENST00000295927 C20orf204Q6ZNR8 217 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 ADAD2Q8NCV1 583 aaKnown RBP19.25■□□□□ 0.67
PTX3-201ENST00000295927 GALNT11Q8NCW6 608 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 ZNF2Q9BSG1 426 aaPredicted RBP19.25■□□□□ 0.67
PTX3-201ENST00000295927 TMEM165Q9HC07 324 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 ZNF222Q9UK12 451 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 HCFC1P51610 2035 aa19.25■□□□□ 0.67
PTX3-201ENST00000295927 VSTM5A8MXK1 200 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 SRRM5B3KS81 715 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 E7EQL1 145 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 EGR1P18146 543 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 TNFSF4P23510 183 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 FPR2P25090 351 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 MDH2P40926 338 aaKnown RBP19.24■□□□□ 0.67
PTX3-201ENST00000295927 GATA4P43694 442 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 TFF3Q07654 80 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 SHEQ5VZ18 495 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 PEG10Q86TG7 708 aaKnown RBP19.24■□□□□ 0.67
PTX3-201ENST00000295927 ZNF431Q8TF32 576 aaPredicted RBP19.24■□□□□ 0.67
PTX3-201ENST00000295927 NEUROG1Q92886 237 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 LIME1Q9H400 295 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 RASL12Q9NYN1 266 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 TREM2Q9NZC2 230 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 HIVEP3Q5T1R4 2406 aa19.24■□□□□ 0.67
PTX3-201ENST00000295927 TRBV6-6A0A0A6YYG2 114 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 TUBAL3A6NHL2 446 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 LMO1P25800 156 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 C4orf17Q53FE4 359 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms