RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 MgmtP26187 211 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tbxa2rP30987 341 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Nhlh1Q02576 133 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Zfp235Q499D5 702 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Fblim1Q71FD7 375 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cpeb3Q7TN99 716 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ino80cQ8BHA0 191 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Stbd1Q8C7E7 338 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lysmd4Q8CC84 293 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 ShfQ8CG80 238 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Zc3h3Q8CHP0 950 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ccdc115Q8VE99 180 aaKnown RBP13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cxcl15Q9WVL7 167 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Minpp1Q9Z2L6 481 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Hist1h1cP15864 212 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Npepl1Q6NSR8 524 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Eml2Q7TNG5 649 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1226Q8VGM5 310 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r51Q8VIC6 319 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Hspb2Q99PR8 182 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gk2Q9WU65 554 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Epha8O09127 1004 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tbx15O70306 602 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Csf2rbP26955 896 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 PkibQ04758 92 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr804Q7TRH7 314 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cela1Q91X79 266 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Atp5sQ9CRA7 200 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ccl20O89093 97 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 P01667 111 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 St8sia3Q64689 380 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cdhr3Q8BL00 831 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Foxj3Q8BUR3 623 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Aph1aQ8BVF7 265 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1394Q8VET2 312 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr582Q8VGV9 319 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Kiss1rQ91V45 396 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tmem19Q91W52 336 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Mrpl14Q9D1I6 145 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lhx6Q9R1R0 363 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 PthQ9Z0L6 115 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr587-ps1A0A1B0GSS1 159 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Sdc1P18828 311 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 SnrpnP63163 240 aaKnown RBP13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Fndc4Q3TR08 231 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr187Q8VEX6 308 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Scgb3a2Q920H1 91 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Fam210bQ9D8B6 190 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ube2dnl2A2AFH2 155 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 EnamO55196 1274 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Htr5aP30966 357 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Egfbp2P36368 261 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Fosl1P48755 273 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Nanos2P60322 136 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rpusd3Q14AI6 344 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Acsf3Q3URE1 583 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cyb561Q60720 250 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gnb3Q61011 340 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Foxb2Q64733 428 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr107Q7TRK4 309 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Q80UB0 333 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vwc2Q8C8N3 324 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr919Q8VF78 315 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr167Q8VGJ5 312 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Mob1aQ921Y0 216 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr888Q9EQA5 314 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 BC048679D3YXE9 172 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm42421F6X8D5 166 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cdhr4H3BJZ2 783 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r120K7N6J6 305 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Klk1b3P00756 261 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Pptc7Q6NVE9 310 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Impad1Q80V26 356 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lhfpl6Q8BM86 200 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lyrm2Q8R033 88 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cacng5Q8VHW4 275 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Q9CWB7 115 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rpl7l1Q9D8M4 246 aaKnown RBP13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r56Q9EPS9 310 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Il5P04401 133 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr506Q7TRU6 314 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ms4a4dQ99N05 225 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 CenpmQ9CQA0 180 aa13.92□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Wdr25E9Q349 535 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr117L7N1Z1 317 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 DaoP18894 345 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Mospd3Q8BGG6 235 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 OacylQ8BML2 685 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr130Q8VFC1 317 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lyzl6Q9DA11 148 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Angptl4Q9Z1P8 410 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr721-ps1A0A140T8T9 324 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1124A2AT86 318 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1224-ps1A3KGY4 311 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm4177D3YTX5 305 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr231E9Q0M4 307 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 C2cd6E9Q152 557 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r127K7N6J5 305 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r142K7N6U0 305 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r115K7N6Y3 295 aa13.91□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 190.5 ms