RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rab3cP62823 227 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cpeb1P70166 561 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vax1Q2NKI2 338 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ly6eQ64253 130 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gpr61Q8C010 449 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 C1ql2Q8CFR0 287 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr1100Q8VFM1 321 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr60Q8VGL4 311 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Lnx2Q91XL2 687 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Aaed1Q9D1A0 226 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Fam210bQ9D8B6 190 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Srxn1Q9D975 136 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Il36aQ9JLA2 160 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 St6galnac5Q9QYJ1 336 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Foxo1Q9R1E0 652 aa11.87□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm2026A2ART4 498 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm15130F6PYN5 206 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Igsf11P0C673 428 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Hoxb1P17919 297 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr13P34984 310 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dnase2P56542 353 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rap1aP62835 184 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Anxa7Q07076 463 aaKnown RBP11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm1123Q1RME4 390 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr145Q60882 310 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ewsr1Q61545 655 aaKnown RBP11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Trappc6aQ78XR0 159 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Fam76bQ80XP8 339 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Atpaf1Q811I0 324 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 CyrenQ8BHZ5 157 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Lpar6Q8BMC0 344 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Slc25a1Q8JZU2 311 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Cd209cQ91ZW9 178 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Rap1bQ99JI6 184 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Elp5Q99L85 300 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 SlirpQ9D8T7 112 aaKnown RBP11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 PaplnQ9EPX2 1280 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr122W4VSP0 330 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 VcanQ62059 3357 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm16368A0A1Y7VNG9 144 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm21972J3QN38 98 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gmeb2P58929 530 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Polr1dP97304 133 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Isg20l2Q3U1G5 368 aaKnown RBP11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Znf629Q6A085 867 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 2210407C18RikQ6YI28 220 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr851Q7TRG0 312 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Krt33aQ8K0Y2 404 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dcp1aQ91YD3 602 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Teddm3Q9CQH1 294 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Bbs10Q9DBI2 713 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Enpp5Q9EQG7 477 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Espl1P60330 2118 aa11.86□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dmrta2A2A9A2 531 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 P06321 130 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 DaoP18894 345 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tmprss9P69525 1065 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 RelbQ04863 558 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Slc39a7Q31125 476 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 DhpsQ3TXU5 369 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 HgsnatQ3UDW8 656 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Csnk2a1Q60737 391 aaKnown RBP11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Sox19Q62249 55 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Zfp819Q80V81 607 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Fbxw13Q8BI57 466 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Srsf4Q8VE97 489 aaKnown RBP11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr830Q8VFJ5 315 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr1002Q8VFK2 318 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Dnaja3Q99M87 480 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Arl4dQ99PE9 201 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Lipt2Q9D009 231 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Snu13Q9D0T1 128 aaKnown RBP11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Exosc8Q9D753 276 aaKnown RBP11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 P2ry4Q9JJS7 361 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tex101Q9JMI7 250 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 SrpxQ9R0M3 464 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ighv5-15A0A0A6YWC7 117 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 D7Ertd443eD2J0Y4 644 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gstp3F6RWR5 210 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr628K7N6B2 316 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tmem71Q149F5 287 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r15Q14C10 299 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 N4bp2l1Q3V2Q8 238 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr140Q60878 302 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 CstbQ62426 98 aaKnown RBP11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Znf250Q7TNU6 535 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tssk5Q8C1R0 372 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Snapc5Q8R2K7 98 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Yif1aQ91XB7 293 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Vmn1r172Q9EPS4 313 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr951Q9EQ94 314 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Smco4Q9JIS3 59 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Elovl1Q9JLJ5 279 aa11.85□□□□□ -0.51
Nup88-201ENSMUST00000035283 Ighv1-54A0A075B5W5 117 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm13723A0A1L1SUP2 315 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr1291-ps1A0A286YE47 326 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Tex13aA2AFS9 377 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Gm14444A2ARW3 426 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr1335B2RVY8 335 aa11.84□□□□□ -0.51
Nup88-201ENSMUST00000035283 Zfp2P08043 459 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 73.3 ms