RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLC35G3Q8N808 338 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 TSTD1Q8NFU3 115 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 OR4X1Q8NH49 305 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 ELOVL1Q9BW60 279 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 ADAM19Q9H013 955 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 VSIRQ9H7M9 311 aa12□□□□□ -0.49
SCARB2-227ENST00000640957 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 MSTNO14793 375 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 CFPP27918 469 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 SFTPDP35247 375 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 IDH3GP51553 393 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-227ENST00000640957 DYNLT3P51808 116 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 RPS16P62249 146 aaKnown RBP11.99□□□□□ -0.49
SCARB2-227ENST00000640957 GNMTQ14749 295 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 OR2AE1Q8NHA4 323 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 RNF133Q8WVZ7 376 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 GINS3Q9BRX5 216 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 RSG1Q9BU20 258 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 KIR2DS5A0A0G2JLQ3 304 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 A0A0G2JNG1 304 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 A0A1W2PPQ1 181 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 KIR2DS3K7RE56 304 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 TBPP20226 339 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 BLKP51451 505 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 KIR2DS5Q14953 304 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 TESK1Q15569 626 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 NUP54Q7Z3B4 507 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 PTX4Q96A99 478 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 GPR173Q9NS66 373 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 CLPSP04118 112 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 GLIPR1P48060 266 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 TFPI2P48307 235 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 HSF1Q00613 529 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 TEX38Q6PEX7 206 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 C1orf87Q8N0U7 546 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 LGI3Q8N145 548 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 HIST1H2AAQ96QV6 131 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 TP53RKQ96S44 253 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 GABRG3Q99928 467 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 PLEKHA2Q9HB19 425 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 GLRX2Q9NS18 164 aa11.99□□□□□ -0.49
SCARB2-227ENST00000640957 PRR19A6NJB7 356 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 ISG15P05161 165 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 TAS2R46P59540 309 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 FUT7Q11130 342 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 CST9LP1Q5W188 147 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 SLC22A25Q6T423 547 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 FAM185AQ8N0U4 392 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 RPUSD4Q96CM3 377 aaKnown RBP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 LRRC61Q9BV99 259 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 EP300Q09472 2414 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 C2CD4DB7Z1M9 353 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 SCGNO76038 276 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 FAM69BQ5VUD6 431 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 RTL6Q6ICC9 239 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 OR2C3Q8N628 320 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 SLC2A9Q9NRM0 540 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 LHFPL6Q9Y693 200 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 SPTY2D1-AS1A0A0U1RR47 76 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 CRYM-AS1A6NIL9 109 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 CEBPZOSA8MTT3 80 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 BCAT2O15382 392 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 IL33O95760 270 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 FGF7P21781 194 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 LMO1P25800 156 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 ELLP55199 621 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 OR1D5P58170 312 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 GNB2P62879 340 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 TMEM267Q0VDI3 215 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCARB2-227ENST00000640957 LIPHQ8WWY8 451 aa11.98□□□□□ -0.49
SCARB2-227ENST00000640957 CACNA1GO43497 2377 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 PCDH15Q96QU1 1955 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 A6NCN8 305 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF705FA8MVS1 300 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-227ENST00000640957 OR2J2O76002 312 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 DXOO77932 396 aaKnown RBP11.97□□□□□ -0.49
SCARB2-227ENST00000640957 POU2F2P09086 479 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF705DP0CH99 300 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-227ENST00000640957 ZNF705BP0CI00 300 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-227ENST00000640957 DEFA4P12838 97 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 DRD1P21728 446 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 EFNA3P52797 238 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 SLC10A1Q14973 349 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 PIGYQ3MUY2 71 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 OR14L1PQ8NHC6 308 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 DOCK7Q96N67 2140 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 SUSD2Q9UGT4 822 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 FUT9Q9Y231 359 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 TNFRSF10CO14798 259 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 CLRN1P58418 232 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 YPEL5P62699 121 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 NDUFAF3Q9BU61 184 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms