RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 BRD3OSQ6XYD6 125 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 Q8N7P7 452 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 ZDHHC22Q8N966 263 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 TNFAIP8L1Q8WVP5 186 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 OR14A2Q96R54 314 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 OR5M11Q96RB7 305 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 S100A13Q99584 98 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 ZNF184Q99676 751 aaPredicted RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 C19orf24Q9BVV8 132 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 METTL9Q9H1A3 318 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 HEXA-AS1Q9H8Q6 139 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 ELL3Q9HB65 397 aaPredicted RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 IL36GQ9NZH8 169 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 GSTK1Q9Y2Q3 226 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 LSM2Q9Y333 95 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 SF3B6Q9Y3B4 125 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 RRP15Q9Y3B9 282 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 ANK3Q12955 4377 aaKnown RBP8.3□□□□□ -1.08
TPM4-207ENST00000588032 JMJD1CQ15652 2540 aa8.3□□□□□ -1.08
TPM4-207ENST00000588032 PNMA8CA0A1B0GUJ8 204 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 hADV38S2A0JD32 116 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 TMEM82A0PJX8 343 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 DEGS1O15121 323 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 RGS9O75916 674 aaPredicted RBP8.29□□□□□ -1.08
TPM4-207ENST00000588032 OR2H2O95918 312 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 RBP4P02753 201 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 CSTBP04080 98 aaKnown RBP8.29□□□□□ -1.08
TPM4-207ENST00000588032 GABRR1P24046 479 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 DUSP1P28562 367 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 EDDM3BP56851 147 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 UBA52P62987 128 aaKnown RBP8.29□□□□□ -1.08
TPM4-207ENST00000588032 TRAM1Q15629 374 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 GRK1Q15835 563 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 UNQ9370/PRO34162Q6UXP9 181 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 Q6YL49 198 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 RNF144BQ7Z419 303 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 PHC2Q8IXK0 858 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 NKAIN3Q8N8D7 197 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 OR4M1Q8NGD0 313 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 OR51T1Q8NGJ9 327 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 OR13C5Q8NGS8 318 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 UFD1Q92890 307 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 TNFRSF14Q92956 283 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 SLC25A28Q96A46 364 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 KCTD12Q96CX2 325 aaKnown RBP8.29□□□□□ -1.08
TPM4-207ENST00000588032 ZNF48Q96MX3 618 aaPredicted RBP8.29□□□□□ -1.08
TPM4-207ENST00000588032 DERL3Q96Q80 235 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 YTHDF1Q9BYJ9 559 aaKnown RBP8.29□□□□□ -1.08
TPM4-207ENST00000588032 CCDC90BQ9GZT6 254 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 FAM192AQ9GZU8 254 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 SIRT7Q9NRC8 400 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 IL36RNQ9UBH0 155 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 ING4Q9UNL4 249 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 FAM96BQ9Y3D0 163 aa8.29□□□□□ -1.08
TPM4-207ENST00000588032 TRAV8-7A0A075B6U6 113 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 A0A0G2JK05 382 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 C17orf98A8MV24 154 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 RNASEK-C17orf49H0YIS7 233 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 NPFFO15130 113 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 PSPNO60542 156 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 HTR3BO95264 441 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 CSN2P05814 226 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 ZNF728P0DKX0 622 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 CALCBP10092 127 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 ZNF44P15621 663 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 PSMA1P25786 263 aaKnown RBP8.28□□□□□ -1.08
TPM4-207ENST00000588032 ERVFRD-1P60508 538 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 GABARAPL2P60520 117 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 SRSF2Q01130 221 aaKnown RBP8.28□□□□□ -1.08
TPM4-207ENST00000588032 SCN1BQ07699 218 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 MLLT11Q13015 90 aaPredicted RBP8.28□□□□□ -1.08
TPM4-207ENST00000588032 TPBGQ13641 420 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 IL13RA2Q14627 380 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 DEFB112Q30KQ8 113 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 MIDNQ504T8 468 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 NHLRC3Q5JS37 347 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 Q6P435 159 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 LINC00596Q86U02 117 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 C11orf42Q8N5U0 333 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 OR4S1Q8NGB4 309 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 PHYHIPQ92561 330 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 SGCDQ92629 289 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 FOXRED1Q96CU9 486 aaPredicted RBP8.28□□□□□ -1.08
TPM4-207ENST00000588032 MRPS24Q96EL2 167 aaKnown RBP8.28□□□□□ -1.08
TPM4-207ENST00000588032 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 ESM1Q9NQ30 184 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 LINC00312Q9Y6C7 94 aa8.28□□□□□ -1.08
TPM4-207ENST00000588032 A0A1W2PPK0 400 aa8.27□□□□□ -1.09
TPM4-207ENST00000588032 DNAJC9-AS1A6NH13 148 aa8.27□□□□□ -1.09
TPM4-207ENST00000588032 H3BUI4 141 aa8.27□□□□□ -1.09
TPM4-207ENST00000588032 SIRPB1O00241 398 aa8.27□□□□□ -1.09
TPM4-207ENST00000588032 PIN1P1O15428 100 aa8.27□□□□□ -1.09
TPM4-207ENST00000588032 SC5DO75845 299 aa8.27□□□□□ -1.09
TPM4-207ENST00000588032 MAS1P04201 325 aa8.27□□□□□ -1.09
TPM4-207ENST00000588032 RNASE1P07998 156 aaKnown RBP8.27□□□□□ -1.09
TPM4-207ENST00000588032 FBP1P09467 338 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms