RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 HAND1O96004 215 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 KNG1P01042 644 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 IGKV1D-12P01611 117 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 IGHV1-46P01743 117 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 CD3DP04234 171 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 TCRBP04435 133 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 RLN1P04808 185 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 CSN2P05814 226 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 ACAA1P09110 424 aaPredicted RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 H2AFB2P0C5Z0 115 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 PTHLHP12272 177 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 HLA-DMAP28067 261 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 S100GP29377 79 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 SLC6A1P30531 599 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 GATA4P43694 442 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 NPBWR2P48146 333 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 RFX2P48378 723 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 TAS2R31P59538 309 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 HERV-K104P61576 105 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 EFNB3Q15768 340 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 ADIPOQQ15848 244 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 IGFBP7Q16270 282 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 MICBQ29980 383 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 ZNF672Q499Z4 452 aaPredicted RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 FAM76BQ5HYJ3 339 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 AGAP6Q5VW22 663 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 TRAT1Q6PIZ9 186 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 WDR82Q6UXN9 313 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 IDO2Q6ZQW0 420 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 PEG10Q86TG7 708 aaKnown RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 MOGAT3Q86VF5 341 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 MUC15Q8N387 334 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 ASCC1Q8N9N2 400 aaKnown RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 BOLLQ8N9W6 283 aaKnown RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 DUSP18Q8NEJ0 188 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 Q8NFD4 153 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 OR4C16Q8NGL9 310 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 ITLN1Q8WWA0 313 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 ITLN2Q8WWU7 325 aaPredicted RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 NRIP2Q9BQI9 281 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 SLC25A21Q9BQT8 299 aaPredicted RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 ST6GALNAC5Q9BVH7 336 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 RAB1BQ9H0U4 201 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 TLNRD1Q9H1K6 362 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 PPA2Q9H2U2 334 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 IFT22Q9H7X7 185 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 HRASLSQ9HDD0 168 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 EHFQ9NZC4 300 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 KCNIP1Q9NZI2 227 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 RNF7Q9UBF6 113 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 AK3Q9UIJ7 227 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 C14orf166Q9Y224 244 aaKnown RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 CEP295Q9C0D2 2601 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 RTTNQ86VV8 2226 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 ASPMQ8IZT6 3477 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 TRAV6A0A075B6T7 132 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 A0A0A6YYD4 124 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 IGHV3-64DA0A0J9YX35 117 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 A0A1B0GWJ7 208 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 TMEM30CPA0ZSE6 113 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 SRRM5B3KS81 715 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 SHISA9B4DS77 424 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 HS3ST1O14792 307 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 ARPC1BO15143 372 aaKnown RBP5.24□□□□□ -1.57
LIG3-206ENST00000586058 PLA2G10O15496 165 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 LANCL1O43813 399 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 CREBL2O60519 120 aaPredicted RBP5.24□□□□□ -1.57
LIG3-206ENST00000586058 DIRAS3O95661 229 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 OR2H2O95918 312 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 FCER2P06734 321 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 CD55P08174 381 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 ADH4P08319 380 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 FCGR3AP08637 254 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 CTXN2P0C2S0 81 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 HRH1P35367 487 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 GABRA2P47869 451 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 PPOXP50336 477 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 BCAP31P51572 246 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 RAG2P55895 527 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 RAB25P57735 213 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 BTG1P62324 171 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 CBX3Q13185 183 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 MAB21L1Q13394 359 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 ZNF146Q15072 292 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 CDK10Q15131 360 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 HFEQ30201 348 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 PLAC9Q5JTB6 97 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 C6orf183Q5T699 404 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 METTL11BQ5VVY1 283 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 SHEQ5VZ18 495 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 SFRP4Q6FHJ7 346 aaPredicted RBP5.24□□□□□ -1.57
LIG3-206ENST00000586058 CRIP3Q6Q6R5 217 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 ACP7Q6ZNF0 438 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 Q6ZR03 302 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 DNM1P46Q6ZS02 220 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 BTN2A1Q7KYR7 527 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 GDPD3Q7L5L3 318 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 RNF144BQ7Z419 303 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 AKAP14Q86UN6 197 aa5.24□□□□□ -1.57
LIG3-206ENST00000586058 LRP11Q86VZ4 500 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms