RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 RHOFQ9HBH0 211 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 PCDHB16Q9NRJ7 776 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 MIOXQ9UGB7 285 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 OTOGQ6ZRI0 2925 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 F5H0A9 414 aaPredicted RBP11.42□□□□□ -0.58
CD44-224ENST00000526669 SH2D1BO14796 132 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 LDLRAD4O15165 306 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 OR7C1O76099 320 aaPredicted RBP11.42□□□□□ -0.58
CD44-224ENST00000526669 LMO4P61968 165 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 RPS27AP62979 156 aaKnown RBP11.42□□□□□ -0.58
CD44-224ENST00000526669 ZNF146Q15072 292 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 SPIN3Q5JUX0 258 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 ATAD3CQ5T2N8 411 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 SLC36A1Q7Z2H8 476 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 BIVMQ86UB2 503 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 RTN4RL2Q86UN3 420 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 CROCCP3Q8IVE0 287 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 ST8SIA4Q92187 359 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 NEIL1Q96FI4 390 aaPredicted RBP11.42□□□□□ -0.58
CD44-224ENST00000526669 CHST6Q9GZX3 395 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 LPAR5Q9H1C0 372 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 LPAR2Q9HBW0 351 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 ING3Q9NXR8 418 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 GLS2Q9UI32 602 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 MAB21L2Q9Y586 359 aa11.42□□□□□ -0.58
CD44-224ENST00000526669 CELSR1Q9NYQ6 3014 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 TMEM82A0PJX8 343 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 A6NHS1 94 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 FAM157AC9JC47 383 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 DVL1O14640 695 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 DEGS1O15121 323 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 SIGLEC5O15389 551 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 PHF1O43189 567 aaPredicted RBP11.41□□□□□ -0.58
CD44-224ENST00000526669 NDUFA2O43678 99 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 CHRM2P08172 466 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 WNT2P09544 360 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 ZNF182P17025 639 aaPredicted RBP11.41□□□□□ -0.58
CD44-224ENST00000526669 PITPNBP48739 271 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 VEGFCP49767 419 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 IL13RA1P78552 427 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 NKAPLQ5M9Q1 402 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 RAB39BQ96DA2 213 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 SDSLQ96GA7 329 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 PPA2Q9H2U2 334 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 COMMD3Q9UBI1 195 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 RAB22AQ9UL26 194 aa11.41□□□□□ -0.58
CD44-224ENST00000526669 TRAV24A0A0B4J272 114 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 ZNF701M0R085 212 aaPredicted RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 SLC33A1O00400 549 aaPredicted RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 SOCS1O15524 211 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 NDUFB3O43676 98 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 PSPNO60542 156 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 FSTL3O95633 263 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 NDUFB7P17568 137 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 SOX6P35712 828 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 GNB2P62879 340 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 LOXL1Q08397 574 aaPredicted RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 MOGAT2Q3SYC2 334 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 PAN3Q58A45 887 aaKnown RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 NHLRC3Q5JS37 347 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 ATPAF1Q5TC12 328 aaPredicted RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 SIGIRRQ6IA17 410 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 ZNF841Q6ZN19 808 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 NLRC3Q7RTR2 1065 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 BPIFB2Q8N4F0 458 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 DTX3Q8N9I9 347 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 OR4S1Q8NGB4 309 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 H1FXQ92522 213 aaKnown RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 DYRK2Q92630 601 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 DGCR14Q96DF8 476 aaKnown RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 SLC25A38Q96DW6 304 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 MRPS24Q96EL2 167 aaKnown RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 TM2D1Q9BX74 207 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 DNTTIP1Q9H147 329 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 ATG5Q9H1Y0 275 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 CCDC59Q9P031 241 aaKnown RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 ABRACLQ9P1F3 81 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 KAAG1Q9UBP8 84 aa11.4□□□□□ -0.58
CD44-224ENST00000526669 SLC25A10Q9UBX3 287 aaPredicted RBP11.4□□□□□ -0.58
CD44-224ENST00000526669 MEX3AA1L020 520 aaKnown RBP11.39□□□□□ -0.59
CD44-224ENST00000526669 ZNF737O75373 536 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 RAB6AP20340 208 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 CPT2P23786 658 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 BLVRBP30043 206 aaPredicted RBP11.39□□□□□ -0.59
CD44-224ENST00000526669 RANBP1P43487 201 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 OR3A1P47881 315 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 LCN2P80188 198 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 MADCAM1Q13477 382 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 EDDM3AQ14507 147 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 ATXN7L3Q14CW9 347 aaPredicted RBP11.39□□□□□ -0.59
CD44-224ENST00000526669 GRK1Q15835 563 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 MPV17LQ2QL34 196 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 ESCO2Q56NI9 601 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 LRRC10Q5BKY1 277 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
CD44-224ENST00000526669 C17orf107Q6ZR85 190 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 LINC00596Q86U02 117 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms