RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TMUB2Q71RG4 321 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 FAM58AQ8N1B3 248 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 KLF14Q8TD94 323 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-210ENST00000517713 ABHD17AQ96GS6 310 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 DHRS9Q9BPW9 319 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 CACNA1GO43497 2377 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 RHBDL1O75783 438 aa22.64■■□□□ 1.22
COL13A1-210ENST00000517713 IFNA7P01567 189 aa22.64■■□□□ 1.22
COL13A1-210ENST00000517713 CTSDP07339 412 aaPredicted RBP22.64■■□□□ 1.22
COL13A1-210ENST00000517713 CECR9P0C854 216 aa22.64■■□□□ 1.22
COL13A1-210ENST00000517713 EIF2S3LQ2VIR3 472 aaKnown RBP22.64■■□□□ 1.22
COL13A1-210ENST00000517713 FAM76BQ5HYJ3 339 aa22.64■■□□□ 1.22
COL13A1-210ENST00000517713 UNQ6126/PRO20091Q6UXV3 157 aa22.64■■□□□ 1.22
COL13A1-210ENST00000517713 ADAT1Q9BUB4 502 aaKnown RBP22.64■■□□□ 1.22
COL13A1-210ENST00000517713 WDR13Q9H1Z4 485 aa22.64■■□□□ 1.22
COL13A1-210ENST00000517713 PRRC2CQ9Y520 2896 aaKnown RBP22.64■■□□□ 1.21
COL13A1-210ENST00000517713 LRP5LA4QPB2 252 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 C5orf51A6NDU8 294 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 SERPINF1P36955 418 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 MPV17P39210 176 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 FAM180AQ6UWF9 173 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 GSG1LQ6UXU4 331 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 SPACA3Q8IXA5 215 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 PPP1R1CQ8WVI7 109 aa22.64■■□□□ 1.21
COL13A1-210ENST00000517713 OR5H1A6NKK0 313 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 EEF1E1-BLOC1S5C9J1V9 151 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 IGLV1-44P01699 117 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 RPA2P15927 270 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 GTF3C1Q12789 2109 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 EXOSC2Q13868 293 aaKnown RBP22.63■■□□□ 1.21
COL13A1-210ENST00000517713 ANKRD55Q3KP44 614 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 WDR86Q86TI4 376 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 ZNF546Q86UE3 836 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 RPRMLQ8N4K4 120 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 RHOFQ9HBH0 211 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 SPACA1Q9HBV2 294 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 PRR13Q9NZ81 148 aa22.63■■□□□ 1.21
COL13A1-210ENST00000517713 C13orf42A0A1B0GVH6 325 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 IL13RA2Q14627 380 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 LRRC37A5PQ49AS3 106 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 C11orf87Q6NUJ2 197 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 MFFQ9GZY8 342 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 RAB18Q9NP72 206 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 AMDHD2Q9Y303 409 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 SPENQ96T58 3664 aaKnown RBP22.62■■□□□ 1.21
COL13A1-210ENST00000517713 ZNF205O95201 554 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 NAPSAO96009 420 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 CFDP00746 253 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-210ENST00000517713 SLC25A4P12235 298 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 FCGR2CP31995 323 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 TIMP3P35625 211 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 SRSF7Q16629 238 aaKnown RBP eCLIP22.62■■□□□ 1.21
COL13A1-210ENST00000517713 TMEM65Q6PI78 240 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 Q6ZS49 121 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 SCCPDHQ8NBX0 429 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 NEK7Q8TDX7 302 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 ARL6Q9H0F7 186 aa22.62■■□□□ 1.21
COL13A1-210ENST00000517713 HSPB6O14558 160 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 ZNF728P0DKX0 622 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 TUBG1P23258 451 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 OR8H3Q8N146 312 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 FAM57AQ8TBR7 257 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 Q9N2K0 584 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 TUBG2Q9NRH3 451 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 WASF3Q9UPY6 502 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 TP53TG5Q9Y2B4 290 aa22.61■■□□□ 1.21
COL13A1-210ENST00000517713 IFNA2P01563 188 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 GLP1RP43220 463 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 OR8G1Q15617 311 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 SGPP2Q8IWX5 399 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 SUMF2Q8NBJ7 301 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 TOMM40LQ969M1 308 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 UBQLN2Q9UHD9 624 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 POLDIP2Q9Y2S7 368 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 IGHV1-18A0A0C4DH31 117 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 ERVH48-1M5A8F1 160 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 C3P1Q6ZMU1 363 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 NMES1Q9C002 83 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 RDH8Q9NYR8 311 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 SLC25A15Q9Y619 301 aa22.6■■□□□ 1.21
COL13A1-210ENST00000517713 C3orf80F5H4A9 247 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 ADAP1O75689 374 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 FXYD4P59646 89 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 CYCSP99999 105 aaKnown RBP22.59■■□□□ 1.21
COL13A1-210ENST00000517713 ZNF474Q6S9Z5 364 aaPredicted RBP22.59■■□□□ 1.21
COL13A1-210ENST00000517713 FAM169BQ8N8A8 192 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 BCL2L14Q9BZR8 327 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 TMEM100Q9NV29 134 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 PURGQ9UJV8 347 aaKnown RBP22.59■■□□□ 1.21
COL13A1-210ENST00000517713 MAB21L2Q9Y586 359 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 ESPL1Q14674 2120 aa22.59■■□□□ 1.21
COL13A1-210ENST00000517713 IGHV2OR16-5A0A0B4J2B6 119 aa22.58■■□□□ 1.21
COL13A1-210ENST00000517713 CRYM-AS1A6NIL9 109 aa22.58■■□□□ 1.21
COL13A1-210ENST00000517713 H0YL77 283 aa22.58■■□□□ 1.21
COL13A1-210ENST00000517713 ZNF324BQ6AW86 544 aaPredicted RBP22.58■■□□□ 1.21
COL13A1-210ENST00000517713 Q8IYB0 196 aa22.58■■□□□ 1.21
COL13A1-210ENST00000517713 OR8G5Q8NG78 346 aa22.58■■□□□ 1.21
COL13A1-210ENST00000517713 IFT22Q9H7X7 185 aa22.58■■□□□ 1.21
COL13A1-210ENST00000517713 INTS1Q8N201 2190 aaKnown RBP22.58■■□□□ 1.21
COL13A1-210ENST00000517713 TEX13DA0A0J9YY54 714 aaPredicted RBP22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms