RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 AKR1C1Q04828 323 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 SNAI3Q3KNW1 292 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 RIPPLY2Q5TAB7 128 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 C9orf135Q5VTT2 229 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 TMEM268Q5VZI3 342 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 DHRS11Q6UWP2 260 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 BTNL8Q6UX41 500 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 UBAC2Q8NBM4 344 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 AKR7LQ8NHP1 331 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 FGFBP3Q8TAT2 258 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 Q96M66 194 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF2Q9BSG1 426 aaPredicted RBP9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 SUCNR1Q9BXA5 334 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 HRH4Q9H3N8 390 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 SAV1Q9H4B6 383 aaPredicted RBP9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 CALHM2Q9HA72 323 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 FAM212BQ9NTI7 297 aaPredicted RBP9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 NECAP2Q9NVZ3 263 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 NSG2Q9Y328 171 aa9.54□□□□□ -0.88
SH3RF1-203ENST00000508685 BORCS7-ASMTA0A0B4J1R7 106 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SIGLEC5O15389 551 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SYNGR3O43761 229 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 KNG1P01042 644 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 IFNA4P05014 189 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 FCGR3AP08637 254 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF32P17041 273 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 PTGER4P35408 488 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SOX8P57073 446 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 AVPI1Q5T686 147 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 GPR157Q5UAW9 335 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 RPL7L1Q6DKI1 246 aaKnown RBP9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 CRIP3Q6Q6R5 217 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 C1QL2Q7Z5L3 287 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 RTN4RL2Q86UN3 420 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 LRTM2Q8N967 370 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 ELL3Q9HB65 397 aaPredicted RBP9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SMCO4Q9NRQ5 59 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SLC7A10Q9NS82 523 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 ZNF701Q9NV72 531 aaPredicted RBP9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 KPTNQ9Y664 436 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 ANKRD11Q6UB99 2663 aaPredicted RBP9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SYNGR4O95473 234 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 CST2P09228 141 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SEC11BP0C7V7 166 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 FOLR2P14207 255 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 CRYGSP22914 178 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 FCGR2CP31995 323 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 PMELP40967 661 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 RAB5CP51148 216 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 PRSS12P56730 875 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SLC10A1Q14973 349 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 PEA15Q15121 130 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 RAB35Q15286 201 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 RPUSD3Q6P087 351 aaKnown RBP9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 TMEM88Q6PEY1 159 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 ASCL4Q6XD76 172 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 OR51F2Q8NH61 342 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 OR2AE1Q8NHA4 323 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 TMEM45BQ96B21 275 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 SYT3Q9BQG1 590 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 PRRG4Q9BZD6 226 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 ARV1Q9H2C2 271 aa9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 MCTS1Q9ULC4 181 aaKnown RBP9.53□□□□□ -0.88
SH3RF1-203ENST00000508685 OR5H8P0DN80 308 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 TMEM225BP0DP42 221 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 MUC1P15941 1255 aaPredicted RBP9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 FAHP16930 419 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 FOXG1P55316 489 aaPredicted RBP9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 MTCP1P56278 107 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 S100A12P80511 92 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 SRSF3P84103 164 aaKnown RBP9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 PSG4Q00888 419 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 RSU1Q15404 277 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 GGNBP1Q5YKI7 109 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 LHFPL2Q6ZUX7 228 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 DMBX1Q8NFW5 382 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 OR5D18Q8NGL1 313 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 NPRL2Q8WTW4 380 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 GLYATL2Q8WU03 294 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 TECTBQ96PL2 329 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 RGCCQ9H4X1 137 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 ACKR4Q9NPB9 350 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 SPRR3Q9UBC9 169 aa9.52□□□□□ -0.89
SH3RF1-203ENST00000508685 A0A096LPE4 126 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 OR6C6A6NF89 314 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNHIT1O43257 154 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 SFTA3P0C7M3 94 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 LPAR6P43657 344 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 HTR5AP47898 357 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 UCP3P55916 312 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 PDZK1IP1Q13113 114 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 CLN3Q13286 438 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 ABCA11PQ4W5N1 156 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 IGF2-ASQ6U949 168 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 C15orf54Q8N8G6 183 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms