RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 MFNGO00587 321 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 INSP01308 110 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 IGLV2-8P01709 118 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 TNNC2P02585 160 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 RPSAP08865 295 aaKnown RBP2.52□□□□□ -2.01
HFM1-208ENST00000488023 CD99P14209 185 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 ATF1P18846 271 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 RCVRNP35243 200 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 ZNF136P52737 540 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 CCL23P55773 120 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 RAB25P57735 213 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 CDK5Q00535 292 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 FMODQ06828 376 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 TMED2Q15363 201 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 LRRC75BQ2VPJ9 315 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 SPIN3Q5JUX0 258 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 SPOPLQ6IQ16 392 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 FAAP20Q6NZ36 180 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 CCDC121Q6ZUS5 278 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 CALHM1Q8IU99 346 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 MUC15Q8N387 334 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 GPR32P1Q8NGA4 272 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 OR1J4Q8NGS1 313 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 PTX4Q96A99 478 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 NEURL3Q96EH8 262 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 MRPL20Q9BYC9 149 aaKnown RBP2.52□□□□□ -2.01
HFM1-208ENST00000488023 MROQ9BYG7 248 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 ASB7Q9H672 318 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 VSIRQ9H7M9 311 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.52□□□□□ -2.01
HFM1-208ENST00000488023 PSG11Q9UQ72 335 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 FARSAQ9Y285 508 aaKnown RBP2.52□□□□□ -2.01
HFM1-208ENST00000488023 KLF13Q9Y2Y9 288 aaPredicted RBP2.52□□□□□ -2.01
HFM1-208ENST00000488023 SLC22A7Q9Y694 548 aa2.52□□□□□ -2.01
HFM1-208ENST00000488023 CEP164Q9UPV0 1460 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 CENPVL3A0A0U1RRI6 287 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 LOC389332A0A1B0GUA5 103 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 FAM183AA6NL82 134 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 TMEM238C9JI98 176 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 INS-IGF2F8WCM5 200 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 STX10O60499 249 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 CNIH1O95406 144 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 SERPINA1P01009 418 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 GABRA1P14867 456 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 CXCL3P19876 107 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 OMGP23515 440 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 IL3RAP26951 378 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 OMPP47874 163 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 REG1BP48304 166 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 IDH3GP51553 393 aaPredicted RBP2.51□□□□□ -2.01
HFM1-208ENST00000488023 PFN3P60673 137 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 ARF6P62330 175 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 GRB2P62993 217 aaKnown RBP2.51□□□□□ -2.01
HFM1-208ENST00000488023 ADIGQ0VDE8 80 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 SKP2Q13309 424 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 PNOCQ13519 176 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 CLEC12BQ2HXU8 276 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 FBXL19-AS1Q494R0 122 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 Q499Y3 187 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 ZNF658BQ4V348 819 aaPredicted RBP2.51□□□□□ -2.01
HFM1-208ENST00000488023 HACD4Q5VWC8 232 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 RASSF6Q6ZTQ3 369 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 MDP1Q86V88 176 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 CD177Q8N6Q3 437 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 OR1P1Q8NH06 330 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 ABHD3Q8WU67 409 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 ANKRD9Q96BM1 317 aaPredicted RBP2.51□□□□□ -2.01
HFM1-208ENST00000488023 OPTNQ96CV9 577 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 OR10C1Q96KK4 312 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 RNF157Q96PX1 679 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 TIPINQ9BVW5 301 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 CHST5Q9GZS9 411 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 PARP12Q9H0J9 701 aaKnown RBP2.51□□□□□ -2.01
HFM1-208ENST00000488023 LINC00597Q9H2U6 94 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 OR51I1Q9H343 314 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 PLSCR3Q9NRY6 295 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 ZNF337Q9Y3M9 751 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 MMACHCQ9Y4U1 282 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 COL2A1P02458 1487 aaPredicted RBP2.51□□□□□ -2.01
HFM1-208ENST00000488023 NCAPD3P42695 1498 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 GAPVD1Q14C86 1478 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 SNAPC4Q5SXM2 1469 aa2.51□□□□□ -2.01
HFM1-208ENST00000488023 KIF13AQ9H1H9 1805 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 PGRMC1O00264 195 aaKnown RBP2.5□□□□□ -2.01
HFM1-208ENST00000488023 ANGPTL7O43827 346 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 SS18L1O75177 396 aaPredicted RBP2.5□□□□□ -2.01
HFM1-208ENST00000488023 DCTN3O75935 186 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 CA2P00918 260 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 REG1AP05451 166 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 FABP1P07148 127 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 MRPL3P09001 348 aaKnown RBP2.5□□□□□ -2.01
HFM1-208ENST00000488023 CXCL2P19875 107 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 SLC18A1P54219 525 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 OR4D2P58180 307 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 MEF2CQ06413 473 aaPredicted RBP2.5□□□□□ -2.01
HFM1-208ENST00000488023 DAZ2Q13117 558 aaKnown RBP2.5□□□□□ -2.01
HFM1-208ENST00000488023 ERCC8Q13216 396 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 ZNF404Q494X3 552 aa2.5□□□□□ -2.01
HFM1-208ENST00000488023 HIGD2BQ4VC39 106 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms