RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 LHBP01229 141 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 FAM90A15PP0C7V4 464 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 FAM90A13PP0C7W8 464 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 FAM90A14PP0C7W9 464 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 FAM90A24PP0C7X0 464 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 TLE4Q04727 773 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 SPIN3Q5JUX0 258 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 LINC00596Q86U02 117 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 DYRK2Q92630 601 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 PALMDQ9NP74 551 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 RASL12Q9NYN1 266 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 NLKQ9UBE8 527 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 GLS2Q9UI32 602 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 FBXO9Q9UK97 447 aaPredicted RBP12.2□□□□□ -0.46
GCA-210ENST00000487445 HSF4Q9ULV5 492 aa12.2□□□□□ -0.46
GCA-210ENST00000487445 SERPINE3A8MV23 424 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 LYNX1G3V0Z9 82 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.19□□□□□ -0.46
GCA-210ENST00000487445 LY6HO94772 140 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 OR2H2O95918 312 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 MELTFP08582 738 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 LYNX1P0DP58 116 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 GDNFP39905 211 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 MRPS15P82914 257 aaKnown RBP12.19□□□□□ -0.46
GCA-210ENST00000487445 ZNF146Q15072 292 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 SUMF2Q8NBJ7 301 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 POM121Q96HA1 1249 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 PLEKHF2Q9H8W4 249 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 ING3Q9NXR8 418 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 WIPI2Q9Y4P8 454 aa12.19□□□□□ -0.46
GCA-210ENST00000487445 TRAV24A0A0B4J272 114 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 OR2AT4A6NND4 320 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 MCRIP1C9JLW8 97 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 KNG1P01042 644 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 LPLP06858 475 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 GABRA2P47869 451 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 MICBQ29980 383 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 HFEQ30201 348 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 Q6P435 159 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 C1orf87Q8N0U7 546 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 TOMM5Q8N4H5 51 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 GPX8Q8TED1 209 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 ST8SIA4Q92187 359 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 TRIM63Q969Q1 353 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 HDHD3Q9BSH5 251 aaPredicted RBP12.18□□□□□ -0.46
GCA-210ENST00000487445 SPACA1Q9HBV2 294 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 AK3Q9UIJ7 227 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 H3BUI4 141 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 SSX5O60225 188 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 PSG2P11465 335 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 COL8A2P25067 703 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 PRDX2P32119 198 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 PNLIPRP3Q17RR3 467 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 PAN3Q58A45 887 aaKnown RBP12.18□□□□□ -0.46
GCA-210ENST00000487445 GVQW1Q8N7I0 195 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 POC5Q8NA72 575 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 CMSS1Q9BQ75 279 aaKnown RBP12.18□□□□□ -0.46
GCA-210ENST00000487445 DPCDQ9BVM2 203 aaPredicted RBP12.18□□□□□ -0.46
GCA-210ENST00000487445 SCPEP1Q9HB40 452 aa12.18□□□□□ -0.46
GCA-210ENST00000487445 TMEM178BH3BS89 294 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 H7C417 338 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 SULT1C2O00338 296 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 CD177Q8N6Q3 437 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 MAFIPQ8WZ33 124 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 ST6GALNAC5Q9BVH7 336 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 CHST6Q9GZX3 395 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
GCA-210ENST00000487445 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.17□□□□□ -0.46
GCA-210ENST00000487445 ZNF701Q9NV72 531 aaPredicted RBP12.17□□□□□ -0.46
GCA-210ENST00000487445 RCC2Q9P258 522 aaKnown RBP12.17□□□□□ -0.46
GCA-210ENST00000487445 MTFP1Q9UDX5 166 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 ZNF230Q9UIE0 474 aaPredicted RBP12.17□□□□□ -0.46
GCA-210ENST00000487445 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
GCA-210ENST00000487445 IGKV1D-17A0A075B6S4 117 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 PPIAL4EA0A075B759 164 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 OOEPA6NGQ2 149 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 PPIAL4DF5H284 164 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 SLC33A1O00400 549 aaPredicted RBP12.16□□□□□ -0.46
GCA-210ENST00000487445 PPIAL4FP0DN26 164 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 DEFA1P59665 94 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 DEFA3P59666 94 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 COL10A1Q03692 680 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 RBM39Q14498 530 aaKnown RBP12.16□□□□□ -0.46
GCA-210ENST00000487445 C20orf204Q6ZNR8 217 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 DNM1P46Q6ZS02 220 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 FAM90A1Q86YD7 464 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 ASCC1Q8N9N2 400 aaKnown RBP12.16□□□□□ -0.46
GCA-210ENST00000487445 NEU4Q8WWR8 484 aaPredicted RBP12.16□□□□□ -0.46
GCA-210ENST00000487445 PPA2Q9H2U2 334 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 ETAA1Q9NY74 926 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 RBMX2Q9Y388 322 aaKnown RBP12.16□□□□□ -0.46
GCA-210ENST00000487445 PPIAL4AQ9Y536 164 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 PSPNO60542 156 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 NDUFS7O75251 213 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 GYPAP02724 150 aa12.16□□□□□ -0.46
GCA-210ENST00000487445 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms