RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PATZ1Q9HBE1 687 aaKnown RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TXNRD2Q9NNW7 524 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TPSG1Q9NRR2 321 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 C20orf141Q9NUB4 165 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NECAP2Q9NVZ3 263 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRPL22Q9NWU5 206 aaKnown RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 PLEK2Q9NYT0 353 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 GNG13Q9P2W3 67 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 SMPXQ9UHP9 88 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 HSF4Q9ULV5 492 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPIPA1Q9UND3 350 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TBL2Q9Y4P3 447 aaKnown RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR51B2Q9Y5P1 312 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 R4GMQ9 66 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NLRC5Q86WI3 1866 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 IGHV2-26A0A0B4J1V2 119 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A1B0GWA3 101 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A1W2PQ45 241 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A1W2PQY0 241 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A1W2PR48 441 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 LRP5LA4QPB2 252 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 FITM1A5D6W6 292 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 HIDE1A8MVS5 230 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF878C9JN71 531 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 WNT10BO00744 389 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 HS3ST1O14792 307 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 RBFOX2O43251 390 aaKnown RBP eCLIP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMPRSS11DO60235 418 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 TBL1XO60907 577 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 B4GALT2O60909 372 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPIPB7O75200 414 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 THY1P04216 161 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 H2BFMP0C1H6 154 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 IGLC2P0DOY2 106 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 IGLC3P0DOY3 106 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 ERGP11308 486 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 SELPP16109 830 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 GLB1P16278 677 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 FUT1P19526 365 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 ANOS1P23352 680 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 CD1BP29016 333 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 MDH2P40926 338 aaKnown RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 NKX2-1P43699 371 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 ID4P47928 161 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 YPEL3P61236 119 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 ERVS71-1P61550 626 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 SUPT4H1P63272 117 aaKnown RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRPS6P82932 125 aaKnown RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 PAX2Q02962 417 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 MRPL49Q13405 166 aaKnown RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 P2RY6Q15077 328 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 SHBQ15464 509 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 RAB30Q15771 203 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 C9orf50Q5SZB4 431 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 LINC01590Q5TEZ4 76 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRAMEF20Q5VT98 475 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 CST9LP1Q5W188 147 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 STUMQ69YW2 141 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 SPSB3Q6PJ21 355 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 GLB1LQ6UWU2 654 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 KMT5CQ86Y97 462 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 RFLNBQ8N5W9 214 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR10P1Q8NGE3 313 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR5A1Q8NGJ0 315 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR51A4Q8NGJ6 313 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 VN1R17PQ8TDU5 208 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 ABHD3Q8WU67 409 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM37Q8WXS4 190 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 KLK6Q92876 244 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 FGF14Q92915 247 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 NKD1Q969G9 470 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 LIN37Q96GY3 246 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF845Q96IR2 970 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 SDF2Q99470 211 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 NKX3-1Q99801 234 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 HSPB9Q9BQS6 159 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 RTBDNQ9BSG5 229 aaPredicted RBP4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 PKIBQ9C010 78 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 NKX2-4Q9H2Z4 354 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 DECR2Q9NUI1 292 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 TAS2R4Q9NYW5 299 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 PADI3Q9ULW8 664 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 CLEC4EQ9ULY5 219 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 PXMP4Q9Y6I8 212 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 MCM3APO60318 1980 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 CCDC88CQ9P219 2028 aa4.92□□□□□ -1.62
VTI1BP4-201ENST00000427516 LOC105371242A0A075B767 164 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SAA2-SAA4A0A096LPE2 208 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 MDFIC2A0A1B0GVS7 189 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF320A2RRD8 509 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 A6NDN8 102 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 CEBPZOSA8MTT3 80 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM14DPA8MWL7 114 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 YPEL1O60688 119 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 SMPD2O60906 423 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 S1PR2O95136 353 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 GOSR1O95249 250 aa4.91□□□□□ -1.62
VTI1BP4-201ENST00000427516 LYPD3O95274 346 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms