RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 DOC2BQ14184 412 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 EDDM3AQ14507 147 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 KRTAP24-1Q3LI83 254 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 ASPHD2Q6ICH7 369 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 METAP1DQ6UB28 335 aaPredicted RBP15.78■□□□□ 0.12
SYNE4-202ENST00000340477 RNF144BQ7Z419 303 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 BCL6BQ8N143 479 aaPredicted RBP15.78■□□□□ 0.12
SYNE4-202ENST00000340477 NKAIN3Q8N8D7 197 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 SGCDQ92629 289 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 METTL9Q9H1A3 318 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 COL6A5A8TX70 2615 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 hADV38S2A0JD32 116 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 MGST3O14880 152 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 ZNF780AO75290 641 aaPredicted RBP15.77■□□□□ 0.12
SYNE4-202ENST00000340477 PTGFRP43088 359 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 OR3A4PP47883 348 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 GABARAPL2P60520 117 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 MEF2CQ06413 473 aaPredicted RBP15.77■□□□□ 0.12
SYNE4-202ENST00000340477 SCN1BQ07699 218 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 RUSC1-AS1Q66K80 236 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 ELP2Q6IA86 826 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 PDZD9Q8IXQ8 264 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 JAGN1Q8N5M9 183 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 ORAI1Q96D31 301 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 C19orf24Q9BVV8 132 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 CHST6Q9GZX3 395 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 ISYNA1Q9NPH2 558 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 ING4Q9UNL4 249 aa15.77■□□□□ 0.12
SYNE4-202ENST00000340477 TMEM82A0PJX8 343 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 DEGS1O15121 323 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 HTR3BO95264 441 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 OR2H2O95918 312 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 MAS1P04201 325 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 PRTN3P24158 256 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 PSMA1P25786 263 aaKnown RBP15.76■□□□□ 0.11
SYNE4-202ENST00000340477 ACTG1P63261 375 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 TRAM1Q15629 374 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 TBCEQ15813 527 aaPredicted RBP15.76■□□□□ 0.11
SYNE4-202ENST00000340477 ACSM3Q53FZ2 586 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 LIPKQ5VXJ0 399 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 TMEM200BQ69YZ2 307 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 CRIP3Q6Q6R5 217 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 C17orf107Q6ZR85 190 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 Q8N7P7 452 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 NR1H4Q96RI1 486 aaPredicted RBP15.76■□□□□ 0.11
SYNE4-202ENST00000340477 SLITRK2Q9H156 845 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 UNKLQ9H9P5 680 aaKnown RBP15.76■□□□□ 0.11
SYNE4-202ENST00000340477 TCF7L1Q9HCS4 588 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 NOX4Q9NPH5 578 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 FAM96BQ9Y3D0 163 aa15.76■□□□□ 0.11
SYNE4-202ENST00000340477 TRAV8-7A0A075B6U6 113 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 MEGF11A6BM72 1044 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 DENRO43583 198 aaKnown RBP15.75■□□□□ 0.11
SYNE4-202ENST00000340477 ERVFRD-1P60508 538 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 MLLT11Q13015 90 aaPredicted RBP15.75■□□□□ 0.11
SYNE4-202ENST00000340477 GPR176Q14439 515 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 IL13RA2Q14627 380 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 ZNF367Q7RTV3 350 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 TRAPPC6BQ86SZ2 158 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 CDH26Q8IXH8 852 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 SVOPQ8N4V2 548 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 SLC25A28Q96A46 364 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 ZNF714Q96N38 554 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 HEXA-AS1Q9H8Q6 139 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 IL36GQ9NZH8 169 aa15.75■□□□□ 0.11
SYNE4-202ENST00000340477 SF3B6Q9Y3B4 125 aaKnown RBP15.75■□□□□ 0.11
SYNE4-202ENST00000340477 DNAJC9-AS1A6NH13 148 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 MRPS14O60783 128 aaKnown RBP15.74■□□□□ 0.11
SYNE4-202ENST00000340477 CDRT1O95170 752 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 OR3A1P47881 315 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 UBE2E1P51965 193 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 UBA52P62987 128 aaKnown RBP15.74■□□□□ 0.11
SYNE4-202ENST00000340477 ZNF273Q14593 569 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 DEFB112Q30KQ8 113 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 PHC2Q8IXK0 858 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 OSR2Q8N2R0 312 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 OR4S1Q8NGB4 309 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 OR10K1Q8NGX5 313 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 FAM216AQ8WUB2 273 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 ZNF48Q96MX3 618 aaPredicted RBP15.74■□□□□ 0.11
SYNE4-202ENST00000340477 PPA2Q9H2U2 334 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 MRPS28Q9Y2Q9 187 aaKnown RBP15.74■□□□□ 0.11
SYNE4-202ENST00000340477 LINC00312Q9Y6C7 94 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 DSCAML1Q8TD84 2053 aa15.74■□□□□ 0.11
SYNE4-202ENST00000340477 RNASEK-C17orf49H0YIS7 233 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 NPFFO15130 113 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 PSPNO60542 156 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 PAHP00439 452 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 RBP4P02753 201 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 FBP1P09467 338 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 ZNF728P0DKX0 622 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 CCL3L1P16619 93 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 SERPINA2P20848 420 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 LMO1P25800 156 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 ERP29P30040 261 aaKnown RBP15.73■□□□□ 0.11
SYNE4-202ENST00000340477 MAP2K4P45985 399 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 P2RX3P56373 397 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 KLRD1Q13241 179 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 TPBGQ13641 420 aa15.73■□□□□ 0.11
SYNE4-202ENST00000340477 HSD17B12Q53GQ0 312 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms