RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 LSM6P62312 80 aaKnown RBP15.24■□□□□ 0.03
SHANK1-201ENST00000293441 OR5C1Q8NGR4 320 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 LANCL1O43813 399 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 TIAL1Q01085 375 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHANK1-201ENST00000293441 CCDC190Q86UF4 302 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 TCRBV16S1A1N1A0A5B0 115 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 ICMTO60725 284 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 TGIF2LXQ8IUE1 241 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 MTFP1Q9UDX5 166 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 FGF9P31371 208 aaPredicted RBP15.23■□□□□ 0.03
SHANK1-201ENST00000293441 SLC25A30Q5SVS4 291 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 RAB18Q9NP72 206 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 GEMIN2O14893 280 aaKnown RBP15.23■□□□□ 0.03
SHANK1-201ENST00000293441 CDC20Q12834 499 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 MIDNQ504T8 468 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 OR4S2Q8NH73 311 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 GPR27Q9NS67 375 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 HMGA2P52926 109 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 SSX1Q16384 188 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 TRDCB7Z8K6 153 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 C1orf185Q5T7R7 199 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 GGNBP1Q5YKI7 109 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 FGF11Q92914 225 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 GPR137Q96N19 417 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 ZNF665Q9H7R5 613 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 ZNF586Q9NXT0 402 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 SLC2A8Q9NY64 477 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 ATP6V1G2-DDX39BF2Z307 99 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 MYPOPQ86VE0 399 aaPredicted RBP15.23■□□□□ 0.03
SHANK1-201ENST00000293441 RHOFQ9HBH0 211 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 KCNMB2Q9Y691 235 aa15.23■□□□□ 0.03
SHANK1-201ENST00000293441 FAM24AA6NFZ4 105 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 UCNP55089 124 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 ASCL5Q7RTU5 278 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 SLC22A18ASQ8N1D0 253 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 PCOLCE2Q9UKZ9 415 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 FAM162BQ5T6X4 162 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 ZNF770Q6IQ21 691 aaPredicted RBP15.22■□□□□ 0.03
SHANK1-201ENST00000293441 ZNF721Q8TF20 911 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 FRRS1LQ9P0K9 344 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 TRIM77I1YAP6 450 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 DHRS2Q13268 280 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 TBC1D26Q86UD7 250 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 GMPPAQ96IJ6 420 aaPredicted RBP15.22■□□□□ 0.03
SHANK1-201ENST00000293441 ABHD14AQ9BUJ0 271 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 GALP22466 123 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 IGKV3-7A0A075B6H7 116 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 APELAP0DMC3 54 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 C21orf58P58505 322 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 FA2HQ7L5A8 372 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 MDP1Q86V88 176 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 TMEM171Q8WVE6 324 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 MSL2Q9HCI7 577 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 LOC102723971A0A1B0GUV8 181 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 MED19A0JLT2 244 aaPredicted RBP15.22■□□□□ 0.03
SHANK1-201ENST00000293441 ST3GAL2Q16842 350 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 MUC20Q8N307 709 aaPredicted RBP15.22■□□□□ 0.03
SHANK1-201ENST00000293441 TMEM52Q8NDY8 209 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 CFHR5Q9BXR6 569 aa15.22■□□□□ 0.03
SHANK1-201ENST00000293441 SPINK4O60575 86 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 S100A8P05109 93 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 RAB32Q13637 225 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 NHLRC2Q8NBF2 726 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 R3HDM4Q96D70 268 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 COL24A1Q17RW2 1714 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 B3GALNT1O75752 331 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 CELA2AP08217 269 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 ZNF429Q86V71 674 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 ZNF680Q8NEM1 530 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 TMEM38BQ9NVV0 291 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 STARD10Q9Y365 291 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 MYO16Q9Y6X6 1858 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 GYPAP02724 150 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 MESP2Q0VG99 397 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 TMEM88Q6PEY1 159 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 SLC45A2Q9UMX9 530 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 DTX4Q9Y2E6 619 aa15.21■□□□□ 0.03
SHANK1-201ENST00000293441 PCM1Q15154 2024 aa15.21■□□□□ 0.02
SHANK1-201ENST00000293441 AMTP48728 403 aa15.21■□□□□ 0.02
SHANK1-201ENST00000293441 PTTG1IPP53801 180 aa15.21■□□□□ 0.02
SHANK1-201ENST00000293441 KRTDAPP60985 99 aa15.21■□□□□ 0.02
SHANK1-201ENST00000293441 NTNG2Q96CW9 530 aa15.21■□□□□ 0.02
SHANK1-201ENST00000293441 FOXS1O43638 330 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 XAF1Q6GPH4 301 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 ADTRPQ96IZ2 230 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 TMPRSS5Q9H3S3 457 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 MS4A5Q9H3V2 200 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 SOCS1O15524 211 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 PMELP40967 661 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 COL19A1Q14993 1142 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 FBXW9Q5XUX1 488 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 LSMEM1Q8N8F7 131 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 OR5R1Q8NH85 324 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 MMP7P09237 267 aaPredicted RBP15.2■□□□□ 0.02
SHANK1-201ENST00000293441 INSIG2Q9Y5U4 225 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 PRR13Q9NZ81 148 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 PTPRZ1P23471 2315 aaPredicted RBP15.2■□□□□ 0.02
SHANK1-201ENST00000293441 QSER1Q2KHR3 1735 aa15.2■□□□□ 0.02
SHANK1-201ENST00000293441 ZNF716A6NP11 495 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms