RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 IGFBP3P17936 291 aaPredicted RBP5.39□□□□□ -1.55
CD44-204ENST00000279452 COX7A1P24310 79 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 MYL9P24844 172 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 GABRA5P31644 462 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 PAX2Q02962 417 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 KLRD1Q13241 179 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 PAN3Q58A45 887 aaKnown RBP5.39□□□□□ -1.55
CD44-204ENST00000279452 ATAD3CQ5T2N8 411 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 RUSC1-AS1Q66K80 236 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ZNF529Q6P280 563 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ZNF773Q6PK81 442 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ZNF782Q6ZMW2 699 aaPredicted RBP5.39□□□□□ -1.55
CD44-204ENST00000279452 PRIMA1Q86XR5 153 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 PHC2Q8IXK0 858 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 OR8H2Q8N162 312 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 OSR2Q8N2R0 312 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 PXT1Q8NFP0 134 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 OR4S1Q8NGB4 309 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 OR5D13Q8NGL4 314 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ZDHHC16Q969W1 377 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 FAM46BQ96A09 425 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 UPRTQ96BW1 309 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 SNX22Q96L94 193 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 TBX15Q96SF7 602 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 SUCNR1Q9BXA5 334 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 FAM234AQ9H0X4 552 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 RHOFQ9HBH0 211 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 PLGRKTQ9HBL7 147 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ISYNA1Q9NPH2 558 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 PCDHB16Q9NRJ7 776 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 TNFRSF19Q9NS68 423 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ZNF69Q9UC07 566 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 ST3GAL6Q9Y274 331 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 LRRC42Q9Y546 428 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 KPTNQ9Y664 436 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 MED13LQ71F56 2210 aa5.39□□□□□ -1.55
CD44-204ENST00000279452 CHD3Q12873 2000 aaKnown RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 MDFIC2A0A1B0GVS7 189 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 A0A1W2PP11 408 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 hADV38S2A0JD32 116 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 FUOMA2VDF0 154 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 MEGF11A6BM72 1044 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 RNF212BA8MTL3 300 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 K7N7A8 449 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 M0R1W7 72 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 MGST3O14880 152 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 PSPNO60542 156 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 ZNF737O75373 536 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 PAHP00439 452 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 SRMP19623 302 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 GLP1RP43220 463 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 OR3A1P47881 315 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 DLX1P56177 255 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 RBM11P57052 281 aaKnown RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 FABP5Q01469 135 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 AESQ08117 197 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 TPBGQ13641 420 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 GPR176Q14439 515 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 ZNF273Q14593 569 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 ZNF146Q15072 292 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 SSX1Q16384 188 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 C11orf91Q3C1V1 193 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 KCTD21Q4G0X4 260 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 KLF17Q5JT82 389 aaPredicted RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 KRBOX4Q5JUW0 171 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 NKAPLQ5M9Q1 402 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 UBE2UQ5VVX9 321 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 TMEM200BQ69YZ2 307 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 CRIP3Q6Q6R5 217 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 METAP1DQ6UB28 335 aaPredicted RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 C17orf107Q6ZR85 190 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 BCL6BQ8N143 479 aaPredicted RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 KIR3DL3Q8N743 410 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 SIGLECL1Q8N7X8 197 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 CHST4Q8NCG5 386 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 LY6G5BQ8NDX9 201 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 OR4D6Q8NGJ1 314 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 TBC1D15Q8TC07 691 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 PHYHIPQ92561 330 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 DACT3Q96B18 629 aaPredicted RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 FOXRED1Q96CU9 486 aaPredicted RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 ZNF714Q96N38 554 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 DUX5Q96PT3 197 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 JMJD8Q96S16 334 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 SELENOIQ9C0D9 397 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 SIRPDQ9H106 197 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 CST11Q9H112 138 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 BANF2Q9H503 90 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 METTL8Q9H825 291 aaKnown RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 NDUFB11Q9NX14 153 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 FAM96BQ9Y3D0 163 aa5.38□□□□□ -1.55
CD44-204ENST00000279452 AK6Q9Y3D8 172 aaKnown RBP5.38□□□□□ -1.55
CD44-204ENST00000279452 A0A087WXM4 84 aa5.37□□□□□ -1.55
CD44-204ENST00000279452 MEIKINA0A087WXM9 373 aa5.37□□□□□ -1.55
CD44-204ENST00000279452 TRGV10A0A0A0MS01 117 aa5.37□□□□□ -1.55
CD44-204ENST00000279452 IGHV1-69DA0A0B4J2H0 117 aa5.37□□□□□ -1.55
CD44-204ENST00000279452 A0A0G2JK05 382 aa5.37□□□□□ -1.55
CD44-204ENST00000279452 LOC100506127A0A0U1RQW1 187 aa5.37□□□□□ -1.55
CD44-204ENST00000279452 CENPVL3A0A0U1RRI6 287 aa5.37□□□□□ -1.55
CD44-204ENST00000279452 SMIM30A4D0T7 59 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms