RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FAM216BQ8N7L0 139 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 NDNFQ8TB73 568 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 KCTD12Q96CX2 325 aaKnown RBP11.73□□□□□ -0.53
VPS25-201ENST00000253794 TMEM59Q9BXS4 323 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 NARFLQ9H6Q4 476 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 ABRACLQ9P1F3 81 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 PCDHB10Q9UN67 800 aa11.73□□□□□ -0.53
VPS25-201ENST00000253794 PPIAL4CA0A0B4J2A2 164 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 TMEM272A0A1B0GTI8 110 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 A0A1B0GW55 424 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 H3BUI4 141 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 K7N7A8 449 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DVL1O14640 695 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 GEMIN2O14893 280 aaKnown RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 CRTAPO75718 401 aaPredicted RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 OR2H2O95918 312 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 CSN2P05814 226 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 GLAP06280 429 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4L2P0CJ85 424 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4L3P0CJ86 424 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4L4P0CJ87 422 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4L5P0CJ88 424 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4L6P0CJ89 424 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4L7P0CJ90 424 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 SEC61A1P61619 476 aaKnown RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 COL10A1Q03692 680 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 ESCO2Q56NI9 601 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 WDR25Q64LD2 544 aaPredicted RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4L9Q6RFH8 374 aaPredicted RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DACT3Q96B18 629 aaPredicted RBP11.72□□□□□ -0.53
VPS25-201ENST00000253794 SNX22Q96L94 193 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DMRTB1Q96MA1 342 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 BARHL1Q9BZE3 327 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 SHARPINQ9H0F6 387 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 LPAR5Q9H1C0 372 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 DUX4Q9UBX2 424 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 CLN8Q9UBY8 286 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 OR5V1Q9UGF6 321 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 RAB22AQ9UL26 194 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 ETV7Q9Y603 341 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 CR1P17927 2039 aa11.72□□□□□ -0.53
VPS25-201ENST00000253794 TRAV24A0A0B4J272 114 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 TMEM82A0PJX8 343 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.53
VPS25-201ENST00000253794 FAM157AC9JC47 383 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 SLC33A1O00400 549 aaPredicted RBP11.71□□□□□ -0.53
VPS25-201ENST00000253794 NDUFB3O43676 98 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 FOXH1O75593 365 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 MPIG6BO95866 241 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 TFF1P04155 84 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 TK1P04183 234 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 IGHV4-31P0DP07 118 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 DUSP1P28562 367 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 GABRA2P47869 451 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 KCNJ3P48549 501 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 CEBPDP49716 269 aaPredicted RBP11.71□□□□□ -0.53
VPS25-201ENST00000253794 GZMKP49863 264 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 PAX2Q02962 417 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 FAM189A2Q15884 450 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 LRRC10Q5BKY1 277 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 OR10K2Q6IF99 312 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 OR8H2Q8N162 312 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 ZNRF1Q8ND25 227 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 DYNC2LI1Q8TCX1 351 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 C18orf12Q96KH6 178 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 URM1Q9BTM9 101 aaKnown RBP11.71□□□□□ -0.53
VPS25-201ENST00000253794 SSBP3Q9BWW4 388 aaPredicted RBP11.71□□□□□ -0.53
VPS25-201ENST00000253794 SELENOIQ9C0D9 397 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 KCNK15Q9H427 330 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 BANF2Q9H503 90 aa11.71□□□□□ -0.53
VPS25-201ENST00000253794 RSL24D1Q9UHA3 163 aaKnown RBP11.71□□□□□ -0.53
VPS25-201ENST00000253794 MALRD1Q5VYJ5 2156 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 A0A0A6YYD4 124 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 A0A0B4J203 849 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 B4DSR2 109 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 DEGS1O15121 323 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 PSPNO60542 156 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 ECDO95905 644 aaPredicted RBP11.7□□□□□ -0.54
VPS25-201ENST00000253794 SELLP14151 372 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 OR3A1P47881 315 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 RORCP51449 518 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 KRTAP1-1Q07627 177 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 IKZF1Q13422 519 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 TAF9Q16594 264 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 IDNKQ5T6J7 187 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 CD276Q5ZPR3 534 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 SIGIRRQ6IA17 410 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 OR5D13Q8NGL4 314 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 C8orf46Q8TAG6 207 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms