RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 UBE2QL1A1L167 161 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 FCGR3AP08637 254 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 ERP29P30040 261 aaKnown RBP15.4■□□□□ 0.06
VIM-201ENST00000224237 OR3A3P47888 321 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 SELENOVP59797 346 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 CHRFAM7AQ494W8 412 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 CD276Q5ZPR3 534 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 MAFIPQ8WZ33 124 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 NRIP2Q9BQI9 281 aa15.4■□□□□ 0.06
VIM-201ENST00000224237 PLSCR5A0PG75 271 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 TMEM82A0PJX8 343 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 ABCD4O14678 606 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 RGS13O14921 159 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 NOS1APO75052 506 aaPredicted RBP15.39■□□□□ 0.05
VIM-201ENST00000224237 IFITM2Q01629 132 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 TMEM17Q86X19 198 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 DYRK2Q92630 601 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 SYT3Q9BQG1 590 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 ALX4Q9H161 411 aaPredicted RBP15.39■□□□□ 0.05
VIM-201ENST00000224237 IFT22Q9H7X7 185 aa15.39■□□□□ 0.05
VIM-201ENST00000224237 DPRXA6NFQ7 191 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 FAM90A27PA6NNH2 459 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 MCRIP1C9JLW8 97 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 NXPH2O95156 264 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 C1QBP02746 253 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 BSPH1Q075Z2 132 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 ZDHHC22Q8N966 263 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 POC1AQ8NBT0 407 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 OR2Z1Q8NG97 314 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 CCDC107Q8WV48 283 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 WFIKKN1Q96NZ8 548 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 ANXA10Q9UJ72 324 aa15.38■□□□□ 0.05
VIM-201ENST00000224237 DIDO1Q9BTC0 2240 aaKnown RBP15.38■□□□□ 0.05
VIM-201ENST00000224237 IGHV3-64DA0A0J9YX35 117 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 A6NLC8 198 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 SNRPGP15A8MWD9 76 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 CREBL2O60519 120 aaPredicted RBP15.37■□□□□ 0.05
VIM-201ENST00000224237 HPXP02790 462 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 GLAP06280 429 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 DUSP1P28562 367 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 CD200P41217 278 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 ARPC4P59998 168 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 TSPAN5P62079 268 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 ADORA2A-AS1P86434 159 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 SNTB1Q13884 538 aaKnown RBP15.37■□□□□ 0.05
VIM-201ENST00000224237 CDK10Q15131 360 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 CDSNQ15517 529 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 SLC22A25Q6T423 547 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 FIP1L1Q6UN15 594 aaKnown RBP15.37■□□□□ 0.05
VIM-201ENST00000224237 OVCH2Q7RTZ1 564 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 SLC36A1Q7Z2H8 476 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 C11orf53Q8IXP5 236 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 RNASE6Q93091 150 aaKnown RBP15.37■□□□□ 0.05
VIM-201ENST00000224237 MRPL24Q96A35 216 aaKnown RBP15.37■□□□□ 0.05
VIM-201ENST00000224237 MRPL37Q9BZE1 423 aaKnown RBP15.37■□□□□ 0.05
VIM-201ENST00000224237 PPA2Q9H2U2 334 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 CA10Q9NS85 328 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 EHFQ9NZC4 300 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 CACNA1BQ00975 2339 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 IGKV1D-8A0A087WSZ0 117 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 SSNA1O43805 119 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 GZMKP49863 264 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 SPIN3Q5JUX0 258 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 ATPAF1Q5TC12 328 aaPredicted RBP15.37■□□□□ 0.05
VIM-201ENST00000224237 PRAMEF6Q5VXH4 476 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 ZNF626Q68DY1 528 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 TERB2Q8NHR7 220 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 LRRC46Q96FV0 321 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 SEC22CQ9BRL7 303 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 ZNF286AQ9HBT8 521 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 HES4Q9HCC6 221 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 CFAP46Q8IYW2 2715 aa15.37■□□□□ 0.05
VIM-201ENST00000224237 NKX2-6A6NCS4 301 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 ZSCAN5BA6NJL1 495 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 PTBP3O95758 552 aaKnown RBP15.36■□□□□ 0.05
VIM-201ENST00000224237 VSIG10L2P0DP72 767 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 RBM39Q14498 530 aaKnown RBP15.36■□□□□ 0.05
VIM-201ENST00000224237 ZNF146Q15072 292 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 FCN2Q15485 313 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 GRK1Q15835 563 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 NDUFA5Q16718 116 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 WDR82Q6UXN9 313 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 SUMF2Q8NBJ7 301 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 LILRB4Q8NHJ6 448 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 NEK7Q8TDX7 302 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 GTF3AQ92664 365 aaKnown RBP15.36■□□□□ 0.05
VIM-201ENST00000224237 MRGPRFQ96AM1 343 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 MYOZ1Q9NP98 299 aaPredicted RBP15.36■□□□□ 0.05
VIM-201ENST00000224237 TAAR3PQ9P1P4 343 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 VSIG4Q9Y279 399 aa15.36■□□□□ 0.05
VIM-201ENST00000224237 FAM221AA4D161 298 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 OR2AT4A6NND4 320 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 C3orf80F5H4A9 247 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 DEGS1O15121 323 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 ZNF44P15621 663 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 MPPED2Q15777 294 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 TMED4Q7Z7H5 227 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 ELMOD3Q96FG2 381 aa15.35■□□□□ 0.05
VIM-201ENST00000224237 ESRP2Q9H6T0 727 aaKnown RBP15.35■□□□□ 0.05
VIM-201ENST00000224237 CHMP1AQ9HD42 196 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms