RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 SptssaQ8R207 71 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr836Q8VFJ3 317 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 PsenenQ9CQR7 101 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Sp6Q9ESX2 376 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Kcnmb4Q9JIN6 210 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Anxa10Q9QZ10 324 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm10439A2AJU2 433 aaKnown RBP12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Zfp616J3QN14 987 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm3099J3QPA5 205 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Vmn2r47K7N709 852 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 H2al1oL7MU04 110 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 HhexP43120 271 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Nr2f6P43136 390 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Arpc4P59999 168 aaKnown RBP12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 MamstrQ0ZCJ7 421 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Asphd1Q2TA57 360 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Q3TEI4 1023 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Dyrk1aQ61214 763 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Lcn4Q62472 185 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Taf9bQ6NZA9 249 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gpr173Q6PI62 373 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 CmblQ8R1G2 245 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Vmn1r228Q8R2A7 333 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mrgpra4Q91WW2 313 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mrps16Q9CPX7 135 aaKnown RBP12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mrps14Q9CR88 128 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Zfp111Q9R164 701 aa12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 CenpeQ6RT24 2474 aaKnown RBP12.88□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm45736A0A1B0GS18 427 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 A0A1Y7VIT9 351 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr557E9Q550 322 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 2010315B03RikJ3QK55 433 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Aldh3b3J3QMK6 479 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Prss39O70169 367 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Rsu1Q01730 277 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Bbs12Q5SUD9 708 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 PcolceQ61398 468 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Snrnp70Q62376 448 aaKnown RBP12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Skida1Q80YR3 822 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 GldnQ8BMF8 549 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ldlrad4Q8BWJ4 306 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 4921517D22RikQ8CET0 269 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 V1ra11Q8R2E6 318 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Elac1Q8VEB6 362 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr1495Q8VEZ4 319 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr790Q8VGJ3 322 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Vmn1r45Q8VIC7 318 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Cd209cQ91ZW9 178 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ppp1r27Q9D119 154 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Rpl7l1Q9D8M4 246 aaKnown RBP12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ndufa7Q9Z1P6 113 aaKnown RBP12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm26992S4R1A3 76 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Flg2Q2VIS4 2362 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Awat1A2ADU9 328 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 LexmA2AVQ5 414 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm498D3YYH9 372 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gm21783J3QM57 227 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Ascl4M0QW46 144 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mab21l1O70299 359 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Cd8bP10300 213 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Sult2a1P52843 285 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Lin54Q571G4 749 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr1106Q7TR57 312 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Depp1Q8K2F3 205 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 ApehQ8R146 732 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Dkk4Q8VEJ3 221 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr291Q8VF60 317 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr1426Q8VG74 311 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 GhitmQ91VC9 346 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Pdzk1ip1Q9CQH0 114 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Q9CQT6 229 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 GlceQ9EPS3 618 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gmeb1Q9JL60 562 aa12.87□□□□□ -0.35
Nup88-202ENSMUST00000108530 Igkv12-89A0A0G2JGW8 112 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Zfp820E9Q5G8 549 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Kcnj15O88932 375 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Fosl2P47930 326 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Polr1dP97304 133 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Smn1P97801 288 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Klf3Q60980 344 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Scgb2b2Q6UGQ3 114 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr890Q7TRD9 314 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Mitd1Q8VDV8 249 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Rnps1Q99M28 305 aaKnown RBP12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Cldnd2Q9D9H2 167 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Rp2Q9EPK2 347 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Bcl3Q9Z2F6 448 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 GipP48756 144 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Hmga2P52927 108 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Pcbd1P61458 104 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 AmbpQ07456 349 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Tmem211Q3UUA0 195 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr142Q60881 305 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Orm3Q63805 206 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr1087Q7TR63 313 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Gpr89aQ8BS95 455 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Klhdc3Q8VEM9 382 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Olfr494Q8VG07 314 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 Nudcd2Q9CQ48 157 aa12.86□□□□□ -0.35
Nup88-202ENSMUST00000108530 1700029P11RikQ9CQ68 150 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms