RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 KLF16Q9BXK1 252 aaPredicted RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 REG4Q9BYZ8 158 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 SLC25A31Q9H0C2 315 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 TRAV8-7A0A075B6U6 113 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 A0A087WUJ7 227 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 TRAV38-1A0A0B4J264 116 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 A0A0G2JMM0 328 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 A0A1W2PP55 124 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 A0A1W2PPB8 328 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 KIR3DP1A8MWS1 328 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 TISP43B9A030 160 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 B9A039 149 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 TNFSF12O43508 249 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 SNAI2O43623 268 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 HTR1AP08908 422 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 GABRA3P34903 492 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 LCN2P80188 198 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 MFAP5Q13361 173 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 DEFB133Q30KQ1 61 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 ALKBH6Q3KRA9 238 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 STUMQ69YW2 141 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 ZNF324BQ6AW86 544 aaPredicted RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 ZNF66Q6ZN08 573 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 ZNF621Q6ZSS3 439 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 MED25Q71SY5 747 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 OR4S1Q8NGB4 309 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 OR4K17Q8NGC6 315 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 TWIST2Q8WVJ9 160 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 ISOC2Q96AB3 205 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 MESP1Q9BRJ9 268 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 C20orf27Q9GZN8 174 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 NXF5Q9H1B4 397 aaKnown RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 ST6GALNAC4Q9H4F1 302 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 Q9N2K0 584 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 EXOSC3Q9NQT5 275 aaKnown RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 TMEM38BQ9NVV0 291 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 JKAMPQ9P055 326 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 PSORS1C1Q9UIG5 152 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 CDC14CA4D256 554 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 GAGE12JA6NER3 117 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 QSOX1O00391 747 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 CTSVO60911 334 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 GAGE7O76087 117 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 IGHV2-5P01817 119 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 GAGE12FP0CL80 117 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 GAGE12GP0CL81 117 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 GAGE12IP0CL82 117 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 PIPP12273 146 aaPredicted RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 NTSP30990 170 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 BRS3P32247 399 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 SLC6A9P48067 706 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 PDLIM4P50479 330 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 GAGE4Q13068 117 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 PRSS8Q16651 343 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 PRSS57Q6UWY2 283 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 SFXN5Q8TD22 340 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 F2RL3Q96RI0 385 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 A4GALTQ9NPC4 353 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 AMDHD2Q9Y303 409 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 A0A087WWC5 75 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 DAPL1A0PJW8 107 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 J3KT08 172 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 FOXH1O75593 365 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 HLA-DQB1P01920 261 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 CRYAAP02489 173 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 MMP16P51512 607 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 ATP1B3P54709 279 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 PIGFQ07326 219 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 HSD52Q0P140 79 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 SGCBQ16585 318 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 UNC50Q53HI1 259 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 DLEU7Q6UYE1 221 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 STYXQ8WUJ0 223 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 APIPQ96GX9 242 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 SLC25A21Q9BQT8 299 aaPredicted RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 RBKSQ9H477 322 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 BEX4Q9NWD9 120 aaPredicted RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 RCC2Q9P258 522 aaKnown RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 KCNE5Q9UJ90 142 aa4.98□□□□□ -1.61
EBF1-211ENST00000622875 MRPS18BQ9Y676 258 aaKnown RBP4.98□□□□□ -1.61
EBF1-211ENST00000622875 A0A1W2PP18 115 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 COLCA2A8K830 154 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 AZIN1O14977 448 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 MPPED1O15442 326 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 MMP23AO75900 390 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 SNCGO76070 127 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 KNG1P01042 644 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 HBZP02008 142 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 RAB40ALP0C0E4 278 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 POLR2JP52435 117 aaKnown RBP4.97□□□□□ -1.61
EBF1-211ENST00000622875 ZP1P60852 638 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 LSM6P62312 80 aaKnown RBP4.97□□□□□ -1.61
EBF1-211ENST00000622875 SLC6A3Q01959 620 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 ATXN7L3Q14CW9 347 aaPredicted RBP4.97□□□□□ -1.61
EBF1-211ENST00000622875 CCSMST1Q4G0I0 132 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 PRR31Q5SQ13 230 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 FAM102AQ5T9C2 384 aaPredicted RBP4.97□□□□□ -1.61
EBF1-211ENST00000622875 HBMQ6B0K9 141 aa4.97□□□□□ -1.61
EBF1-211ENST00000622875 LYPD4Q6UWN0 246 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms