RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GMFBP60983 142 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 PAX8Q06710 450 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 DYNC1I2Q13409 638 aaKnown RBP12.04□□□□□ -0.48
COMMD4-225ENST00000569245 CEACAM21Q3KPI0 293 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 C1orf100Q5SVJ3 147 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 DDI2Q5TDH0 399 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 CD276Q5ZPR3 534 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 WDR82Q6UXN9 313 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 C11orf53Q8IXP5 236 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 OR5A2Q8NGI9 324 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 AP3S1Q92572 193 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 SLC6A7Q99884 636 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 NUDT16L1Q9BRJ7 211 aaKnown RBP12.04□□□□□ -0.48
COMMD4-225ENST00000569245 UQCC2Q9BRT2 126 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 SUCNR1Q9BXA5 334 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 NUP50Q9UKX7 468 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 SLC7A11Q9UPY5 501 aa12.04□□□□□ -0.48
COMMD4-225ENST00000569245 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 TMEM210A6NLX4 147 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 SLC17A2O00624 439 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 TMPRSS2O15393 492 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 VENTXO95231 258 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 HCKP08631 526 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 OCMP0CE72 109 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-225ENST00000569245 ZNF93P35789 620 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-225ENST00000569245 RANBP1P43487 201 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 GPM6AP51674 278 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 PLCXD3Q63HM9 321 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 RBMS3Q6XE24 437 aaKnown RBP12.03□□□□□ -0.48
COMMD4-225ENST00000569245 ZNF841Q6ZN19 808 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 LHFPL2Q6ZUX7 228 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 FAM90A1Q86YD7 464 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 OR6M1Q8NGM8 313 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 HPSE2Q8WWQ2 592 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 ACOT12Q8WYK0 555 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 CPNE2Q96FN4 548 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-225ENST00000569245 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 MMP27Q9H306 513 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 ABRACLQ9P1F3 81 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 WNK2Q9Y3S1 2297 aa12.03□□□□□ -0.48
COMMD4-225ENST00000569245 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.48
COMMD4-225ENST00000569245 IGHV3OR16-10A0A075B7F0 116 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 OR5B21A6NL26 309 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 ZNF732B4DXR9 585 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 ENSAO43768 121 aaKnown RBP12.02□□□□□ -0.49
COMMD4-225ENST00000569245 FSHBP01225 129 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 MUC1P15941 1255 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-225ENST00000569245 HTR2CP28335 458 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 RBP2P50120 134 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 ATP1B3P54709 279 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 PAX2Q02962 417 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 KISS1Q15726 138 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 IDNKQ5T6J7 187 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 CRIP3Q6Q6R5 217 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 JAGN1Q8N5M9 183 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 SCCPDHQ8NBX0 429 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 MCFD2Q8NI22 146 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 BORCS8Q96FH0 119 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 FGF23Q9GZV9 251 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-225ENST00000569245 MS4A7Q9GZW8 240 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-225ENST00000569245 TLNRD1Q9H1K6 362 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 PLGRKTQ9HBL7 147 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 CTSZQ9UBR2 303 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 DNAJB11Q9UBS4 358 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 STEAP1Q9UHE8 339 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 DAPK2Q9UIK4 370 aa12.02□□□□□ -0.49
COMMD4-225ENST00000569245 FAM230AA0A1W2PPH8 454 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 PQLC2LA1A4F0 135 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 CLPXO76031 633 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 CALCBP10092 127 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 SLC2A2P11168 524 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-225ENST00000569245 CAPZA1P52907 286 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 MTCP1P56278 107 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 SCAND1P57086 179 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 HILS1P60008 231 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 GNG3P63215 75 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 RAB11BQ15907 218 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 FAM76BQ5HYJ3 339 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 DMRTC1Q5HYR2 192 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 KLF17Q5JT82 389 aaPredicted RBP12.01□□□□□ -0.49
COMMD4-225ENST00000569245 HES5Q5TA89 166 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 LINC00299Q6ZSB3 139 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 RNF144BQ7Z419 303 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 OR5T2Q8NGG2 359 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 TRMT10AQ8TBZ6 339 aaKnown RBP12.01□□□□□ -0.49
COMMD4-225ENST00000569245 NPRL2Q8WTW4 380 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 ST8SIA4Q92187 359 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 SLC25A28Q96A46 364 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 SEH1LQ96EE3 360 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 CCL13Q99616 98 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 CNTD2Q9H8S5 307 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 ZNF69Q9UC07 566 aa12.01□□□□□ -0.49
COMMD4-225ENST00000569245 IGKV1-27A0A075B6S5 117 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 C22orf46C9J442 243 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 TRIM77I1YAP6 450 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 DVL1O14640 695 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 TNFRSF13BO14836 293 aaPredicted RBP12□□□□□ -0.49
COMMD4-225ENST00000569245 AKR7A2O43488 359 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 LIPFP07098 398 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms