RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 A6NLC8 198 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A22PA8MWA6 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A12PA8MX19 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A5PA8MXJ8 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A23PA8MXZ1 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 C1QL1O75973 258 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 S100A8P05109 93 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 HOXB5P09067 269 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 SRP19P09132 144 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A15PP0C7V4 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A13PP0C7W8 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A14PP0C7W9 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FAM90A24PP0C7X0 464 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 OR5H8P0DN80 308 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 FCGR2AP12318 317 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 RPL35P42766 123 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 NPBWR2P48146 333 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 ZNF41P51814 821 aaPredicted RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 POLR2GP62487 172 aaKnown RBP eCLIP3.8□□□□□ -1.8
CTSC-208ENST00000533897 ELOBQ15370 118 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 PIGYQ3MUY2 71 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 TMEM176BQ3YBM2 270 aaPredicted RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 NRN1LQ496H8 165 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 ACSF3Q4G176 576 aaPredicted RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 TMEM211Q6ICI0 200 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 CLEC9AQ6UXN8 241 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 ZFP82Q8N141 532 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 ZNF561Q8N587 486 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 OR5D18Q8NGL1 313 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 OR11L1Q8NGX0 322 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 DYRK2Q92630 601 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 RELTQ969Z4 430 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 ABHD14AQ9BUJ0 271 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 LYRM2Q9NU23 88 aaPredicted RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 RYDENQ9NUL5 291 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 TMEM38BQ9NVV0 291 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 NECAP2Q9NVZ3 263 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 MLXQ9UH92 298 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 A0A0J9YW62 118 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 LRRC3CA6NJW4 275 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 TRDCB7Z8K6 153 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 GEMIN2O14893 280 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 P0C879 139 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 HOXA5P20719 270 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 SERPINA2P20848 420 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 MDKP21741 143 aaPredicted RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 SULT1A1P50225 295 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 CLDN17P56750 224 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 RBM11P57052 281 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 EWSR1Q01844 656 aaKnown RBP eCLIP3.8□□□□□ -1.8
CTSC-208ENST00000533897 CHAF1BQ13112 559 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 CALHM1Q8IU99 346 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 SELENOHQ8IZQ5 122 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 DEFB119Q8N690 84 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 SLC35G3Q8N808 338 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 OR10H5Q8NGA6 315 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 OR2AJ1Q8NGZ0 328 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 SAP25Q8TEE9 199 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 RARRES2Q99969 163 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 PARD6GQ9BYG4 376 aaPredicted RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 ZC4H2Q9NQZ6 224 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 MRPS18CQ9Y3D5 142 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 WDR87Q6ZQQ6 2873 aa3.8□□□□□ -1.8
CTSC-208ENST00000533897 CHD3Q12873 2000 aaKnown RBP3.8□□□□□ -1.8
CTSC-208ENST00000533897 A0A0G2JMM0 328 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 A0A1W2PPB8 328 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 A0A1W2PRS3 328 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 ZNF503-AS2A6NEH8 195 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 KIR3DP1A8MWS1 328 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 NPIPB11E5RHQ5 1161 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.79□□□□□ -1.8
CTSC-208ENST00000533897 M0R135 149 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 NTN3O00634 580 aaPredicted RBP3.79□□□□□ -1.8
CTSC-208ENST00000533897 DHHO43323 396 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 GDF9O60383 454 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 ZFAND5O76080 213 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 FBP1P09467 338 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 CCL3P10147 92 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 MMP9P14780 707 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 RND2P52198 227 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 Q0VFX4 171 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 ZNF726P1Q15940 193 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 ZNF506Q5JVG8 444 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 FAM69BQ5VUD6 431 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 CLDND2Q8NHS1 167 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 FNDC9Q8TBE3 224 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 C14orf79Q96F83 325 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 ZNF799Q96GE5 643 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 CRB3Q9BUF7 120 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 SLC35B3Q9H1N7 401 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 TREM1Q9NP99 234 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 ATPIF1Q9UII2 106 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 NOSIPQ9Y314 301 aaKnown RBP3.79□□□□□ -1.8
CTSC-208ENST00000533897 ASPMQ8IZT6 3477 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 SHANK1Q9Y566 2161 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 IGKV3D-15A0A087WSY6 115 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 NSG1A0A0A6YYJ2 146 aa3.79□□□□□ -1.8
CTSC-208ENST00000533897 A0A0G2JRQ6 117 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms