RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ECI1P42126 302 aa22.72■■□□□ 1.23
COL13A1-210ENST00000517713 UCP2P55851 309 aa22.72■■□□□ 1.23
COL13A1-210ENST00000517713 TMEM211Q6ICI0 200 aa22.72■■□□□ 1.23
COL13A1-210ENST00000517713 KCTD9Q7L273 389 aa22.72■■□□□ 1.23
COL13A1-210ENST00000517713 CXorf67Q86X51 503 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-210ENST00000517713 HS3ST6Q96QI5 342 aa22.72■■□□□ 1.23
COL13A1-210ENST00000517713 PDCD10Q9BUL8 212 aa22.72■■□□□ 1.23
COL13A1-210ENST00000517713 DPCDQ9BVM2 203 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-210ENST00000517713 OPN3Q9H1Y3 402 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-210ENST00000517713 CLEC4MQ9H2X3 399 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-210ENST00000517713 C12orf4Q9NQ89 552 aa22.72■■□□□ 1.23
COL13A1-210ENST00000517713 FXYD6-FXYD2A0A087WZ82 144 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 NOS1APO75052 506 aaPredicted RBP22.71■■□□□ 1.23
COL13A1-210ENST00000517713 IGKV3-15P01624 115 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 OR5H8P0DN80 308 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 GLRA1P23415 457 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 HTR2BP41595 481 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 ERVS71-1P61550 626 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 SORDQ00796 357 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 FXYD6Q9H0Q3 95 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 AKAP13Q12802 2813 aa22.71■■□□□ 1.23
COL13A1-210ENST00000517713 MKRN2OSH3BPM6 223 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 WDR1O75083 606 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 SFT2D2O95562 160 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 CD8AP01732 235 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 PGAM2P15259 253 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 OR1J1Q8NGS3 322 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 SLC25A40Q8TBP6 338 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 LUZP4Q9P127 313 aa22.7■■□□□ 1.23
COL13A1-210ENST00000517713 RFPL4AA6NLU0 287 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 RFPL4AL1F8VTS6 287 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 ARPC5O15511 151 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 MPC2O95563 127 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 IL24Q13007 206 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 OPCMLQ14982 345 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 ZNF660Q6AZW8 331 aaPredicted RBP22.7■■□□□ 1.22
COL13A1-210ENST00000517713 ZNF680Q8NEM1 530 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 OR51I2Q9H344 312 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 ZNF286AQ9HBT8 521 aa22.7■■□□□ 1.22
COL13A1-210ENST00000517713 ZNF71Q9NQZ8 489 aaPredicted RBP22.7■■□□□ 1.22
COL13A1-210ENST00000517713 CEP250Q9BV73 2442 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 DBX1A6NMT0 343 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 M0R233 179 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 RAC2P15153 192 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 MPV17LQ2QL34 196 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 SLC22A25Q6T423 547 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 CLEC18BQ6UXF7 455 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 C17orf78Q8N4C9 275 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 SEC22AQ96IW7 307 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 PKIBQ9C010 78 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 IL36RNQ9UBH0 155 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 C14orf166Q9Y224 244 aaKnown RBP22.69■■□□□ 1.22
COL13A1-210ENST00000517713 TRAV14DV4A0A0A6YYC5 116 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 TPD52L2O43399 206 aaKnown RBP22.69■■□□□ 1.22
COL13A1-210ENST00000517713 FGL1Q08830 312 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 P2RY6Q15077 328 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 EXTL1Q92935 676 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 RTL8AQ9BWD3 113 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 PLK3Q9H4B4 646 aa22.69■■□□□ 1.22
COL13A1-210ENST00000517713 FAM25EA8MYX2 175 aa22.68■■□□□ 1.22
COL13A1-210ENST00000517713 SUPT4H1P63272 117 aaKnown RBP22.68■■□□□ 1.22
COL13A1-210ENST00000517713 SLC9A3R2Q15599 337 aa22.68■■□□□ 1.22
COL13A1-210ENST00000517713 DHRS11Q6UWP2 260 aa22.68■■□□□ 1.22
COL13A1-210ENST00000517713 SSUH2Q9Y2M2 353 aa22.68■■□□□ 1.22
COL13A1-210ENST00000517713 CRHP06850 196 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 PRKACAP17612 351 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 S100A1P23297 94 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 CALCRP30988 508 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 PTGER4P35408 488 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 BEND4Q6ZU67 534 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 MICU1Q9BPX6 476 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 DECR2Q9NUI1 292 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 RCC2Q9P258 522 aaKnown RBP22.67■■□□□ 1.22
COL13A1-210ENST00000517713 FAM215AQ9Y5M1 114 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 Q6ZPA2 131 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 MARS2Q96GW9 593 aaKnown RBP22.67■■□□□ 1.22
COL13A1-210ENST00000517713 ZNF488Q96MN9 340 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 SCNM1Q9BWG6 230 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 CHMP1AQ9HD42 196 aaPredicted RBP22.67■■□□□ 1.22
COL13A1-210ENST00000517713 COMMD9Q9P000 198 aa22.67■■□□□ 1.22
COL13A1-210ENST00000517713 A0A0B4J2A0 478 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 SELEP16581 610 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 IKZF1Q13422 519 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 IGFBP7Q16270 282 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 C1orf185Q5T7R7 199 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 BHLHA15Q7RTS1 189 aaPredicted RBP22.66■■□□□ 1.22
COL13A1-210ENST00000517713 LINC00596Q86U02 117 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 LIME1Q9H400 295 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 OBP2BQ9NPH6 170 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 SHPKQ9UHJ6 478 aa22.66■■□□□ 1.22
COL13A1-210ENST00000517713 IQCF6A8MYZ5 107 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 J3QT63 122 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 KNG1P01042 644 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 PSG7Q13046 419 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 COQ8AQ8NI60 647 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 RPS2P15880 293 aaKnown RBP22.65■■□□□ 1.22
COL13A1-210ENST00000517713 DUSP1P28562 367 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 S100A11P31949 105 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 ALKBH6Q3KRA9 238 aa22.65■■□□□ 1.22
COL13A1-210ENST00000517713 KRTCAP3Q53RY4 240 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms