RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	SCGN	O76038	276 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	MPIG6B	O95866	241 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	NRAS	P01111	189 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	NGF	P01138	241 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	CELA3B	P08861	270 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	IGHV4-31	P0DP07	118 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	ZNF14	P17017	642 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	SLC6A1	P30531	599 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	SRP14	P37108	136 aa	Known RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	IDH3G	P51553	393 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	MTCP1	P56278	107 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	SNTB2	Q13425	540 aa	Known RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	GK2	Q14410	553 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	HLX	Q14774	488 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	PPA1	Q15181	289 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	TBC1D28	Q2M2D7	210 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	PLA1A	Q53H76	456 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	PLCXD3	Q63HM9	321 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	RAB12	Q6IQ22	244 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	LHFPL2	Q6ZUX7	228 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	C22orf34	Q6ZV56	151 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	RFPL4B	Q6ZWI9	263 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	BHLHA15	Q7RTS1	189 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	THNSL2	Q86YJ6	484 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	MUC15	Q8N387	334 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	C3orf56	Q8N813	242 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	WDR31	Q8NA23	367 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	CHST4	Q8NCG5	386 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	TMEM104	Q8NE00	496 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	OR56B2P	Q8NGI1	322 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	LILRB1	Q8NHL6	650 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	KCNG3	Q8TAE7	436 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	C10orf105	Q8TEF2	133 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	CHAC2	Q8WUX2	184 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	PIGC	Q92535	297 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	UPRT	Q96BW1	309 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	PPP1R14B	Q96C90	147 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	CMBL	Q96DG6	245 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	CPNE2	Q96FN4	548 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	RNF170	Q96K19	258 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	ZNF75A	Q96N20	296 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	JMJD8	Q96S16	334 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	NEURL2	Q9BR09	285 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	CACNG6	Q9BXT2	260 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	LPAR5	Q9H1C0	372 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	OR51B6	Q9H340	312 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	DPAGT1	Q9H3H5	408 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	BANF2	Q9H503	90 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	OPA3	Q9H6K4	179 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	ELL3	Q9HB65	397 aa	Predicted RBP	5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	CDH20	Q9HBT6	801 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	HRASLS	Q9HDD0	168 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	GFOD1	Q9NXC2	390 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	GHRL	Q9UBU3	117 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	MTFP1	Q9UDX5	166 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	GPR160	Q9UJ42	338 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	SLC7A11	Q9UPY5	501 aa		5.68	□□□□□ -1.5
RACK1-231	ENST00000514183	IGKV1-27	A0A075B6S5	117 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183		A0A096LNT2	108 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183		A0A0A6YYD4	124 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183		A0A0B4J293	547 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183		A0A1W2PP11	408 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	MEIS3P1	A6NDR6	274 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	TMEM235	A6NFC5	223 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	ZNF850	A8MQ14	1090 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	VSTM5	A8MXK1	200 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	INMT-MINDY4	F8WBC2	141 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	BOLA2-SMG1P6	H3BVE0	249 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	RAB27B	O00194	218 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	SULT1C2	O00338	296 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	PLAT	P00750	562 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	CD8A	P01732	235 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	FCER2	P06734	321 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	LPL	P06858	475 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.67	□□□□□ -1.5	4e-7	■■■□□ 16.6
RACK1-231	ENST00000514183	CSF1	P09603	554 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	TMEM225B	P0DP42	221 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	CBR1	P16152	277 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	GIF	P27352	417 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	ALDH3B1	P43353	468 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	COMP	P49747	757 aa	Predicted RBP	5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	VEGFC	P49767	419 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	RBP2	P50120	134 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	CCR6	P51684	374 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	FUT6	P51993	359 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	RAB25	P57735	213 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	ZP1	P60852	638 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	PRDX4	Q13162	271 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	PCGF3	Q3KNV8	242 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	ZNF260	Q3ZCT1	412 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	CDNF	Q49AH0	187 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	SLC22A6	Q4U2R8	563 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	OLFML2A	Q68BL7	652 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	SLC22A25	Q6T423	547 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	C1QL2	Q7Z5L3	287 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	RTN4RL2	Q86UN3	420 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	MYPOP	Q86VE0	399 aa	Predicted RBP	5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	C17orf78	Q8N4C9	275 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	OR5L1	Q8NGL2	311 aa		5.67	□□□□□ -1.5
RACK1-231	ENST00000514183	OR10K1	Q8NGX5	313 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms